Gene Sfum_2107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2107 
Symbol 
ID4459566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2578807 
End bp2579079 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content57% 
IMG OID639702874 
Producthistone family protein DNA-binding protein 
Protein accessionYP_846225 
Protein GI116749538 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000844989 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00906741 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAAAAG CAGATTTGGT TTCCAAGATT GCGGGAGCCG GGGGTATTAC GAAGGCCCAG 
GCGGAAAAGG CGGTCGACGG TTTTGTCGCG GCGGTATCTC AAGCGCTTTC GACCGGCGAG
AAGGTGACTC TGGTGGGATT CGGCACATTC AGCGTCGGAA GCAGGTCGCA GCGGGAAGGC
CGCAATCCCA GAACCGGTGA AAAGATCAAG ATCCCCGCCT CCAAGGTGGT CAAGTTCAAG
CCGGGGAAGA GCTTGAGCGA CAAAGTGAAG TAG
 
Protein sequence
MTKADLVSKI AGAGGITKAQ AEKAVDGFVA AVSQALSTGE KVTLVGFGTF SVGSRSQREG 
RNPRTGEKIK IPASKVVKFK PGKSLSDKVK