More than 300 homologs were found in PanDaTox collection
for query gene Namu_3972 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_3972  HAD-superfamily hydrolase, subfamily IA, variant 3  100 
 
 
379 aa  720    Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00807242  normal  0.0158039 
 
 
-
 
NC_009664  Krad_1478  HAD-superfamily hydrolase, subfamily IA, variant 3  50.48 
 
 
220 aa  180  2.9999999999999997e-44  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0104021  normal  0.265718 
 
 
-
 
NC_013521  Sked_32600  haloacid dehalogenase superfamily enzyme, subfamily IA  50.28 
 
 
222 aa  162  8.000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.158524  normal 
 
 
-
 
NC_013174  Jden_2195  HAD-superfamily hydrolase, subfamily IA, variant 3  43.14 
 
 
224 aa  160  3e-38  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3319  HAD-superfamily hydrolase, subfamily IA, variant 3  55.43 
 
 
224 aa  149  6e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.168668  normal 
 
 
-
 
NC_013235  Namu_4663  HAD-superfamily hydrolase, subfamily IA, variant 3  51.38 
 
 
215 aa  147  2.0000000000000003e-34  Nakamurella multipartita DSM 44233  Bacteria  normal  0.828051  normal 
 
 
-
 
NC_008009  Acid345_3929  HAD family hydrolase  43.14 
 
 
224 aa  146  5e-34  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.436954  normal  0.193081 
 
 
-
 
NC_012850  Rleg_1297  HAD-superfamily hydrolase, subfamily IA, variant 3  47.83 
 
 
222 aa  144  2e-33  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.525568  normal 
 
 
-
 
NC_014151  Cfla_0403  HAD-superfamily hydrolase, subfamily IA, variant 3  44.79 
 
 
215 aa  144  3e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1208  HAD-superfamily hydrolase, subfamily IA, variant 3  46.74 
 
 
222 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4703  HAD family hydrolase  46.15 
 
 
224 aa  138  1e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_10440  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  43.11 
 
 
242 aa  138  1e-31  Brachybacterium faecium DSM 4810  Bacteria  hitchhiker  0.00307768  n/a   
 
 
-
 
NC_004310  BR0861  HAD superfamily hydrolase  46.2 
 
 
227 aa  137  2e-31  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0852  HAD superfamily hydrolase  46.2 
 
 
227 aa  137  2e-31  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3098  HAD-superfamily hydrolase, subfamily IA, variant 3  51.22 
 
 
214 aa  138  2e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.206377  n/a   
 
 
-
 
NC_009667  Oant_2365  HAD family hydrolase  45.65 
 
 
227 aa  135  9.999999999999999e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.491316  n/a   
 
 
-
 
NC_008688  Pden_4839  HAD family hydrolase  45.58 
 
 
224 aa  135  9.999999999999999e-31  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1388  putative phosphatase  42.51 
 
 
218 aa  134  1.9999999999999998e-30  Dickeya zeae Ech1591  Bacteria  hitchhiker  0.00329661  n/a   
 
 
-
 
NC_009953  Sare_4784  HAD family hydrolase  43.52 
 
 
215 aa  131  2.0000000000000002e-29  Salinispora arenicola CNS-205  Bacteria  normal  0.625758  decreased coverage  0.0000248953 
 
 
-
 
NC_007492  Pfl01_3528  HAD family hydrolase  44.89 
 
 
222 aa  127  3e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.58335  normal  0.428685 
 
 
-
 
NC_009784  VIBHAR_06436  hypothetical protein  31.46 
 
 
214 aa  125  9e-28  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_3313  putative phosphatase  37.61 
 
 
218 aa  124  4e-27  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00109043  normal 
 
 
-
 
NC_010498  EcSMS35_2448  putative phosphatase  41.2 
 
 
216 aa  123  5e-27  Escherichia coli SMS-3-5  Bacteria  normal  0.745831  normal 
 
 
-
 
NC_011353  ECH74115_3432  putative phosphatase  41.2 
 
 
216 aa  122  7e-27  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.166368  normal 
 
 
-
 
NC_012850  Rleg_1626  HAD-superfamily hydrolase, subfamily IA, variant 3  43.5 
 
 
223 aa  122  9e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0186201  normal  0.633699 
 
 
-
 
CP001509  ECD_02218  predicted hydrolase or phosphatase  41.2 
 
 
216 aa  122  9.999999999999999e-27  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1363  HAD-superfamily hydrolase, subfamily IA, variant 3  41.2 
 
 
216 aa  122  9.999999999999999e-27  Escherichia coli DH1  Bacteria  normal  0.0110117  n/a   
 
 
-
 
NC_010468  EcolC_1359  putative phosphatase  41.2 
 
 
216 aa  122  9.999999999999999e-27  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.348521 
 
 
-
 
NC_012892  B21_02178  hypothetical protein  41.2 
 
 
216 aa  122  9.999999999999999e-27  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2442  putative phosphatase  41.2 
 
 
216 aa  122  9.999999999999999e-27  Escherichia coli HS  Bacteria  normal  0.647489  n/a   
 
 
-
 
NC_009708  YpsIP31758_1446  putative phosphatase  39.45 
 
 
218 aa  121  1.9999999999999998e-26  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1822  putative phosphatase  39.45 
 
 
218 aa  121  1.9999999999999998e-26  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1554  putative phosphatase  39.45 
 
 
218 aa  121  1.9999999999999998e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2777  putative phosphatase  35.89 
 
 
224 aa  121  1.9999999999999998e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.779945  n/a   
 
 
-
 
NC_009801  EcE24377A_2586  putative phosphatase  40.74 
 
 
216 aa  121  1.9999999999999998e-26  Escherichia coli E24377A  Bacteria  normal  0.118565  n/a   
 
 
-
 
NC_014210  Ndas_3540  HAD-superfamily hydrolase, subfamily IA, variant 3  43 
 
 
209 aa  120  3.9999999999999996e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.983537  normal  0.491386 
 
 
-
 
NC_010658  SbBS512_E2669  putative phosphatase  41.55 
 
 
216 aa  120  4.9999999999999996e-26  Shigella boydii CDC 3083-94  Bacteria  normal  0.91748  n/a   
 
 
-
 
NC_013421  Pecwa_1487  putative phosphatase  35.75 
 
 
224 aa  118  9.999999999999999e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  0.751605  n/a   
 
 
-
 
NC_010338  Caul_2162  HAD family hydrolase  44.07 
 
 
216 aa  118  1.9999999999999998e-25  Caulobacter sp. K31  Bacteria  normal  normal  0.0225096 
 
 
-
 
NC_011369  Rleg2_1449  HAD-superfamily hydrolase, subfamily IA, variant 3  40.91 
 
 
226 aa  118  1.9999999999999998e-25  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.0077861  normal 
 
 
-
 
NC_009380  Strop_4343  HAD family hydrolase  41.03 
 
 
231 aa  118  1.9999999999999998e-25  Salinispora tropica CNB-440  Bacteria  normal  0.195907  normal 
 
 
-
 
NC_012880  Dd703_2556  putative phosphatase  38.65 
 
 
218 aa  117  3e-25  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3307  HAD-superfamily hydrolase subfamily IA, variant 3  45.13 
 
 
735 aa  117  3.9999999999999997e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.081208  normal 
 
 
-
 
NC_011149  SeAg_B2474  putative phosphatase  39.37 
 
 
219 aa  115  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.764335  n/a   
 
 
-
 
NC_011083  SeHA_C2574  putative phosphatase  39.37 
 
 
219 aa  115  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A2562  putative phosphatase  39.37 
 
 
219 aa  115  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.166759  normal 
 
 
-
 
NC_011080  SNSL254_A2519  putative phosphatase  39.37 
 
 
219 aa  115  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.0435339  normal  0.279321 
 
 
-
 
NC_011205  SeD_A2682  putative phosphatase  39.37 
 
 
219 aa  115  1.0000000000000001e-24  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2837  putative phosphatase  36.59 
 
 
219 aa  114  3e-24  Enterobacter sp. 638  Bacteria  normal  0.390104  normal 
 
 
-
 
NC_014158  Tpau_3077  HAD-superfamily hydrolase, subfamily IA, variant 3  45.23 
 
 
212 aa  114  3e-24  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.79741  n/a   
 
 
-
 
NC_010505  Mrad2831_3383  HAD family hydrolase  48.45 
 
 
221 aa  111  3e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.603016  normal  0.0568392 
 
 
-
 
NC_008541  Arth_0649  HAD family hydrolase  48.85 
 
 
234 aa  104  2e-21  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
BN001308  ANIA_01216  Glycerol-3-phosphate phosphatasePutative uncharacterized protein ; [Source:UniProtKB/TrEMBL;Acc:Q9UVC6]  33.49 
 
 
236 aa  101  2e-20  Aspergillus nidulans FGSC A4  Eukaryota  hitchhiker  0.00109898  normal  0.137881 
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  39.72 
 
 
218 aa  102  2e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_006691  CNF03180  hypothetical protein  41.41 
 
 
325 aa  101  3e-20  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006682  CNM01370  conserved hypothetical protein  34.1 
 
 
250 aa  99  1e-19  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.647335  n/a   
 
 
-
 
NC_006685  CNC02470  phosphatase, putative  34.91 
 
 
411 aa  97.4  3e-19  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
NC_006682  CNM01280  glycerol-1-phosphatase, putative  35.59 
 
 
237 aa  91.7  2e-17  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.370898  n/a   
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  36.82 
 
 
213 aa  90.9  4e-17  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2488  HAD family hydrolase  33.17 
 
 
237 aa  89.7  7e-17  Thermobifida fusca YX  Bacteria  normal  0.271509  n/a   
 
 
-
 
NC_013552  DhcVS_338  hypothetical protein  32.26 
 
 
456 aa  89.4  9e-17  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.00693249  n/a   
 
 
-
 
NC_014212  Mesil_0179  HAD-superfamily hydrolase, subfamily IA, variant 3  37.07 
 
 
218 aa  88.6  1e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  31.71 
 
 
456 aa  88.6  2e-16  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  35.58 
 
 
222 aa  88.6  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_3792  HAD-superfamily hydrolase, subfamily IA, variant 3  31.92 
 
 
229 aa  87.4  4e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0374  HAD family hydrolase  30.29 
 
 
456 aa  85.5  0.000000000000001  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.0000852801  n/a   
 
 
-
 
NC_008009  Acid345_3787  HAD family hydrolase  36.76 
 
 
238 aa  84.7  0.000000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.85061  normal 
 
 
-
 
NC_013730  Slin_0136  HAD-superfamily hydrolase, subfamily IA, variant 3  31.25 
 
 
225 aa  84.7  0.000000000000002  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  37.24 
 
 
241 aa  84.3  0.000000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_013730  Slin_2877  beta-phosphoglucomutase  31.9 
 
 
219 aa  84  0.000000000000004  Spirosoma linguale DSM 74  Bacteria  normal  0.0767657  normal 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  36.26 
 
 
218 aa  83.6  0.000000000000005  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  37.97 
 
 
232 aa  83.2  0.000000000000007  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_013132  Cpin_5088  beta-phosphoglucomutase  28.12 
 
 
219 aa  82.8  0.000000000000009  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00016924  normal  0.408522 
 
 
-
 
NC_007777  Francci3_2637  HAD family hydrolase  37.77 
 
 
286 aa  82.4  0.00000000000001  Frankia sp. CcI3  Bacteria  normal  0.403398  normal  0.292856 
 
 
-
 
NC_013061  Phep_1395  HAD-superfamily hydrolase, subfamily IA, variant 3  33.89 
 
 
201 aa  80.9  0.00000000000003  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.0347939 
 
 
-
 
NC_011831  Cagg_1516  HAD-superfamily hydrolase, subfamily IA, variant 3  36.08 
 
 
227 aa  80.9  0.00000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013162  Coch_0670  beta-phosphoglucomutase  31.05 
 
 
207 aa  80.1  0.00000000000005  Capnocytophaga ochracea DSM 7271  Bacteria  normal  0.922957  n/a   
 
 
-
 
NC_013132  Cpin_3992  HAD-superfamily hydrolase, subfamily IA, variant 3  28.57 
 
 
218 aa  80.5  0.00000000000005  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.177922  normal  0.23268 
 
 
-
 
NC_010084  Bmul_0864  HAD family hydrolase  35.61 
 
 
226 aa  80.5  0.00000000000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1593  beta-phosphoglucomutase family hydrolase  35.48 
 
 
202 aa  80.1  0.00000000000006  Opitutus terrae PB90-1  Bacteria  normal  normal  0.113259 
 
 
-
 
NC_010581  Bind_0935  HAD family hydrolase  32.86 
 
 
235 aa  80.1  0.00000000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.941543  normal 
 
 
-
 
NC_009656  PSPA7_3229  putative hydrolase  37.5 
 
 
238 aa  79.7  0.00000000000007  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0208525  n/a   
 
 
-
 
NC_013595  Sros_1428  putative phosphatase  36.67 
 
 
212 aa  79.7  0.00000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.307964  normal  0.0744833 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  34.47 
 
 
249 aa  79.3  0.00000000000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_007512  Plut_2091  Beta-phosphoglucomutase hydrolase  33.48 
 
 
233 aa  79  0.0000000000001  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  32.34 
 
 
248 aa  79  0.0000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1980  HAD family hydrolase  32.07 
 
 
202 aa  79  0.0000000000001  Shewanella sp. MR-4  Bacteria  hitchhiker  0.0000000561924  normal  0.0500569 
 
 
-
 
NC_008322  Shewmr7_1994  HAD family hydrolase  32.07 
 
 
202 aa  79  0.0000000000001  Shewanella sp. MR-7  Bacteria  hitchhiker  0.0000168215  unclonable  0.0000194697 
 
 
-
 
NC_008577  Shewana3_2067  HAD family hydrolase  32.07 
 
 
202 aa  79  0.0000000000001  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.00000117425  hitchhiker  0.0000127527 
 
 
-
 
NC_008463  PA14_37770  putative hydrolase  35.84 
 
 
222 aa  78.6  0.0000000000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.00140245  normal  0.135547 
 
 
-
 
NC_009363  OSTLU_10396  predicted protein  35.39 
 
 
168 aa  77.8  0.0000000000003  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  34.7 
 
 
223 aa  77.4  0.0000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  34.87 
 
 
243 aa  77.4  0.0000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0397  beta-phosphoglucomutase family hydrolase  26.19 
 
 
223 aa  77  0.0000000000005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4817  HAD-superfamily hydrolase, subfamily IA, variant 3  34.24 
 
 
235 aa  77  0.0000000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.821962  n/a   
 
 
-
 
NC_011729  PCC7424_4434  HAD-superfamily hydrolase, subfamily IA, variant 3  28.92 
 
 
217 aa  76.3  0.0000000000009  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_2233  HAD family hydrolase  30.57 
 
 
225 aa  76.3  0.0000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_0452  HAD-superfamily hydrolase, subfamily IA, variant 3  35.79 
 
 
227 aa  75.9  0.000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0717  HAD-superfamily hydrolase  35.05 
 
 
224 aa  75.1  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2682  HAD-superfamily hydrolase, subfamily IA, variant 3  24.49 
 
 
226 aa  75.5  0.000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
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