| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_4343 |
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| Symbol | |
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| ID | 5060828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4919938 |
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| End bp | 4920633 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640476605 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001161149 |
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| Protein GI | 145596852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.195907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGGT CGCTCCTCTT TGACATCGAC GGCACGCTCG TGGACTCGGC AAAGGCGGTA
GTCGCCAATT GGAGTACGGT TGCCTCCCGC TACGGCGTTG ATGCTGACGC CATCCTGCGG
GTCTGCCACG GCCGGCGCGA CGAGGATGTG GTGCCAGAGT TCTTTCCGCC CGAGGCTGTC
GCGTCGGTCC TGCGGGAGAT GGCCGACCTT GCGCTCTCAC ACGCCGAGTT GGTGAGCCCG
ATTCCGGGGG CCGTCGCTGC GCTGAACACG ATCACCGACG GCACGTGGGC GGTCGTCACC
TCCGGGTCTC GTGCTCTCAT GACCTCCCGG ATGCGCGGTG CTGGTCTGCG AATTCCGTCG
GTCATCGTGG CGGCGGAGGA CGTCCGCCAC GGAAAACCCG ATCCCGAGGG GTATCTGCTG
GCCGCCCGGC AACTCGGTGT TGCCGCCGCG TCCTGCGTGG TGGTGGAGGA TTCCCCCGCC
GGAGTCGCCG CCGGCAAGGC GGCCGGGGCC GCGGTCGTGG CACTCGCCAC AACCCATGCC
CCTGATTCGC TGACCCAGGC CGACGTCGTC ATCGACGATC TCAGCGAGCT GAACCGGGCG
ATCGGGTATT TGCCGGCGTT GTCTGGTGCG GCCCCTTCCG GGCATGAAGG GCGGGCGGGG
GCGGGTGGTC AGAACTCCCG CCACTCTGGC CACTGA
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| Protein sequence | MDRSLLFDID GTLVDSAKAV VANWSTVASR YGVDADAILR VCHGRRDEDV VPEFFPPEAV
ASVLREMADL ALSHAELVSP IPGAVAALNT ITDGTWAVVT SGSRALMTSR MRGAGLRIPS
VIVAAEDVRH GKPDPEGYLL AARQLGVAAA SCVVVEDSPA GVAAGKAAGA AVVALATTHA
PDSLTQADVV IDDLSELNRA IGYLPALSGA APSGHEGRAG AGGQNSRHSG H
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