Gene YpsIP31758_1446 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1446 
Symbol 
ID5384860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp1685340 
End bp1685996 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content52% 
IMG OID640864429 
Productputative phosphatase 
Protein accessionYP_001400425 
Protein GI153947509 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGTGTA AAGGTTTTCT TTTTGATTTA GATGGGACGT TGGTTGATTC ACTACCTGTT 
GTTGAACGTG CCTGGATTGG CTGGGCGCAA CGTCGAGGCG TTAATCCATC AGAAGTTCTG
GATTTTATTC ATGGTAAACA AGCGATTACC TCTTTGCGTC ATTTTATGCC GGGTGCCAGT
GAAGCTGAAA TTCAGGACGA GTTTCTGGCA TTAGAGCAAA TTGAAGCCAA TGATACGGAG
GGGGTAACTG CGCTACCAGG GGCGGTGGCA CTGTTGACCC GGTTGAATGA ACTGGCTATT
CCGTGGGCGA TAGTGACTTC AGGTTCGATA CCTGTTGCCT CAGCTCGCCG GGCGGCAGGT
TGTTTGCCAG AGCCGAAAGT GTTTGTGACC GCCGAATTGG TGAAGCAGGG TAAACCTGCG
CCCGATGCCT ATTTATTAGG GGCCGAACGT TTAGGCCTTG CCCCTGCGGA TTGTATTGTG
GTGGAAGATG CCCCCGCCGG GATCCTTTCG GGGCTAGCGG CCGGTTGTCA GGTGATCGCG
GTTAATGCAC CAACAGATAC CCCAAAACTC GATCAGGTTG ATCTGGTGCT TCACTCACTG
GAGCAATTGG TGGTAGACGC CACTGCTCAT GGTGCGGTGG TTCGGTTATT GCCTTAA
 
Protein sequence
MECKGFLFDL DGTLVDSLPV VERAWIGWAQ RRGVNPSEVL DFIHGKQAIT SLRHFMPGAS 
EAEIQDEFLA LEQIEANDTE GVTALPGAVA LLTRLNELAI PWAIVTSGSI PVASARRAAG
CLPEPKVFVT AELVKQGKPA PDAYLLGAER LGLAPADCIV VEDAPAGILS GLAAGCQVIA
VNAPTDTPKL DQVDLVLHSL EQLVVDATAH GAVVRLLP