| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2637 |
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| Symbol | |
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| ID | 3906310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3113535 |
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| End bp | 3114395 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879962 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_481728 |
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| Protein GI | 86741328 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.403398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.292856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGAGCC TTGCGGCGGT TTTCTTCGAC ATGGATGGCC TGCTCGTTGA CACCGAGCCG
ATTTGGACCA TCGCCGAGCA CGAGGCGGCG GCGCGGCTGG GCGGCGAGTT CACCCCGGCG
ATGAAACGAG CCATGATCGG CCACGGCATC GACACCGCCG TGCCGCTCAT GGTGTCGATG
CTCGGCCGGC CGGCGTCCGA CGTGGCGCCG ACGGCGGAGT TCCTGCTGCG CCGCTCCGCC
GAGCTGTTCC GCGAGCCCGG TGCGATCGTC CCGCAGCCCG GGGCGGTGGA GCTGCTCGTC
GCGCTGCGAG CGGCGGGTGT CCCGACCGCG CTGGTTTCCT CGTCCTTCCG CGACCTGATG
GAGCCGGTGC TGCACGTCAT CGGTGACGAG TTCTTCGCCG TGACGGTCGC CGGCGATGAG
GTCACTCGCC GCAAGCCGGA CCCGGAGCCC TACCTGACCG CCGCCCGGGT GCTCGGCGTC
GACCCGGTTC GCTGCGTCGT CTTGGAGGAC AGCCCGTCGG GAGCGCGCGC CGGGGTGGCG
GCCGGGTGCG CGACCATCAT GATCCCGTCC ATGCCGGATC TGCTCGACCT GGCCGCTTCG
GGGGCTTCGG GGGCTTCGGG GGCTTCGGGG GCTTCGGGGG CCTCGGGGGC CTTGGAGGCC
TTGGAGGCCT CGGGCGTCGC GGCTCGCGGC GAGCCGGTGC CCGCCGGGCT CGCGGCGCTC
CTGGCGAGCC TGCACGACGT CACCCCGGAC CTCATGGAGT CCCTCACCAC CCCCCGCCTC
AGCCCGCCCC TTCGCCCCAG CCGTCCTGGA TGCGAGGTTG GGGGAGTAAG GCACGGTTTT
GGGGGCGAAG ACCGGGCGTA G
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| Protein sequence | MGSLAAVFFD MDGLLVDTEP IWTIAEHEAA ARLGGEFTPA MKRAMIGHGI DTAVPLMVSM
LGRPASDVAP TAEFLLRRSA ELFREPGAIV PQPGAVELLV ALRAAGVPTA LVSSSFRDLM
EPVLHVIGDE FFAVTVAGDE VTRRKPDPEP YLTAARVLGV DPVRCVVLED SPSGARAGVA
AGCATIMIPS MPDLLDLAAS GASGASGASG ASGASGALEA LEASGVAARG EPVPAGLAAL
LASLHDVTPD LMESLTTPRL SPPLRPSRPG CEVGGVRHGF GGEDRA
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