Gene Caul_2162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2162 
Symbol 
ID5899617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2345270 
End bp2345920 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID641562653 
ProductHAD family hydrolase 
Protein accessionYP_001683788 
Protein GI167646125 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0225096 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCAA CCAAGATTTT CGCCGCCTTC CTGTTCGACA TGGACGGCAC CATCCTCGAT 
TCCATCGCCG TGGCCGAGCG GGTCTGGGGC GACTGGGCGC TGCGTCACGG CCTGGACGTC
GAAGCCTTCC TGCCGACCAT CCACGGCGTG CGGGCCGAGG AGACGATCCG CCGCCAGAAC
CTGGCCGGCG TCGATGTCGC GCGCGAGACC GAGGCGATCC TGCGGGCCGA GGTCGCCGAC
ATCGAAGGCG TGATCCCCAT CCTGGGCGCC GAGGTGTTCC TGCGCGCCCT GCCGGCCGAG
CGCTGGGCCG TCGTCACCTC GGCCCAGCGC GAACTGGCCA TACGCCGCCT GGAAGCCGCC
GGCCTGCCCG TCCCCGCCGT CCTGGTCACG GCGGAGGACG TATCGCCCGG AAAGCCCGCG
CCGGATGGCT ATGCGCTCGC CGCCGAACGC CTGGGCGTGG CGGCGGACGC CTGCTTGGTG
TTCGAGGACG CCCCCGCCGG CGTGCTGGCC GGCGAGGCGG CCGGCGCCGA GGTGCTCGTG
ATCACCGCCA CGCACCGTCA TCCGTTCGCG ACGGCTCATG CCGCGCTGGC GGACTATTCG
AACGTTCAGA TCGCGGTCGA GACGGACGGC CTGCGTCTGG CCCGCGCCTA A
 
Protein sequence
MLPTKIFAAF LFDMDGTILD SIAVAERVWG DWALRHGLDV EAFLPTIHGV RAEETIRRQN 
LAGVDVARET EAILRAEVAD IEGVIPILGA EVFLRALPAE RWAVVTSAQR ELAIRRLEAA
GLPVPAVLVT AEDVSPGKPA PDGYALAAER LGVAADACLV FEDAPAGVLA GEAAGAEVLV
ITATHRHPFA TAHAALADYS NVQIAVETDG LRLARA