Gene CNM01370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNM01370 
Symbol 
ID3255169 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006682 
Strand+ 
Start bp403116 
End bp404244 
Gene Length1129 bp 
Protein Length250 aa 
Translation table 
GC content49% 
IMG OID638254289 
Productconserved hypothetical protein 
Protein accessionXP_568461 
Protein GI58262102 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.647335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCCAA TTACCATCAA GGCAAGAGGT ATCCTCTTCG ATCTCGACGG TACTTTGATC 
AGTGAACAGT TTACTTGTAA TACTTCTTGG GTTTTCCAAT ATCTGACCTT GCATGGCAGG 
CTCGACAACG ATATGCGAGT CTGTATGGCA TAAGTGGGCG GAAGTGTACC CCGTCGATCT 
TACAGAGGTG TTCAAGAGTA CGTGCGAACG CCTATCCTGA GCGATTGATG GCTGAGCCGT 
TGTCTTGATC CGCATGACGA GCTGATCCGT TCCCTGACAG GTTCTCACGG TATCAGGACC 
AGAGAACTGC TGCGCCACTG GCTCAACATC ACTGATCCGG TGGAGCTTGA GGTACGTATC 
CTACCAGTGA CACTGGGTCC GACCGTCATC GAGACTGCTG ATGGGATGGT GTCACATATT 
AGACAGCCAC TGAGAAGTTT GAGACCGACG TACTCAAAGA GGCCCAACGG CTTGCGTCGA 
TTGGTAAAGG TGGAATTACT TTACTCCCCG GGGTTGAGAA GCTCTTACTA GCCCTCAATG 
CAGCCTCTAA GGATGCTGCG AGATGGGCTA TTGTCACTTC TGGTACGTTT GTTTATCAAC 
TTCTTCCGTC CTAACGAACC ACTGATCGAT CACTTATTTC AGCGACCAAT GCGTATGCCA 
CCAATGCCAT CACCACTCTT TCTCTCCCCA GGACTTCTCA TCTTATCACC GCAGATGAGG 
TTTCACAAGG CAAGCCCCAC CCCGAGCCAT ACATCATGGG TGCTGCAGCC CTTGGATTGA 
AGCCAACAGA CTGTATCGTC TTTGAGGATG CCCCATCAGG AGTGAAAGCA GGAGTTGCGA 
GTGGCGCACG AGTGGTTGCG GTTTGCACCA GTCACAAAAG GTCAGCTTTG GAGGGATTAG 
GTGCGCATTT GATCGTTGAG AACCTTTCAG AGTAAGCATA CACGCCTTCT CTTTCGTACA 
TGAGCTGACA GAGCATCTAG CATCAATCTT GACACTGAAG GGGACGAGGT TACTATCATA 
TTTCCCAACT AATTATCATC ATACGTACAT CAAATTTATC TAGGGTTATC AGTGGGATCA 
TCTGAATTAC TGCTTCCATC GTTCGGTATG CTACATTTTG CATCAGTGA
 
Protein sequence
MAPITIKARG ILFDLDGTLI SSTTICESVW HKWAEVYPVD LTEVFKSSHG IRTRELLRHW 
LNITDPVELE TATEKFETDV LKEAQRLASI GKGGITLLPG VEKLLLALNA ASKDAARWAI 
VTSATNAYAT NAITTLSLPR TSHLITADEV SQGKPHPEPY IMGAAALGLK PTDCIVFEDA 
PSGVKAGVAS GARVVAVCTS HKRSALEGLG AHLIVENLSD INLDTEGDEG YQWDHLNYCF 
HRSVCYILHQ