| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Namu_3972 |
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| Symbol | |
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| ID | 8449591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nakamurella multipartita DSM 44233 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013235 |
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| Strand | - |
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| Start bp | 4384410 |
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| End bp | 4385549 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 645043017 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003203253 |
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| Protein GI | 258654097 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.00807242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0158039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCG CCCAGGAATT GGGCCTGCCC GTGCTCGACC TGGACACCCT GACCAACCCG
CTTCTCGACG CGTTGCCGGT CTCGCTGCTC GCCGAACACT GGCTCTCGCC GGCCCACGGC
ACCGCCGTCC GCGACGGCCG GTACGCCGCG CTGCGGGCGG TGGCCGCGCA GGTGGTGGCC
ACCGCCGGCG GGGCAGTGCT GGTCGCCCCG TTCACCGCCG AATTGGCCGG CGGTGACGCG
TGGGTCCGGC TCCGAACCGC GCTGGCGCCG ACCGACCCGC TGGTGGTGTG GATCCGCGGG
GATGCCGAGC TGTTCGCGCG GCGGCGGGGG CAGCGGGCGG CGGAGCGCGA CCGGCACCGG
CCGGACGGGC CCGCGCCGGT GCCGCCGGCC GTCGATCATC TGGCCGTCGA CGCCGACCTC
ACCACGGCAC AGCAGGTTTT CCGGGTCCGG CGGGCGCTGG GCGACCGGAT TCCCGTCGCA
CCGGACGCGC CGATCCTCGG CCTCGACGTC GACGCGCTGC TGTTCGACCT GGATGGCACG
CTGGCCGACT CGACCGCATC GGTGGCTCGC TGCTGGGACC GGTTGGCCCG CGAGTTCGGG
GCGGCGCCGG CTCTGGTGCA GGCCAATCAC GGACAGCCGG CCGACGTCCT GGTCGGCAAG
CTGGTCGGAC CCGATCCGCA AGCCGCCGGA CGGGCCCGGA TCCGGCAGCT GGAGATCGAG
GACGCGCCCT CGATCGACCG GATACCCGGT GCCGCCGAAC TCTTCTCGTC CGTCCCGGAG
TCGCGCCGGG CCATCGTCAC CTCCGGCGTC CGCGAGCTGG CGGCCGCGCG CCTGCGCGCC
GCCGGGCTGC CGATCCCGGC CACCATGGTC ACCTTCGACG ACGTGATGCG CGGAAAGCCC
GATCCGGAGC CCTATCTGCT GGCCGCGTCG CGGCTGGGGG TGGACCCGGC GCGCTGCCTG
GTGTTCGAAG ACGCGCCGGC CGGCATCGCG TCGGCCCGGG CGGCCGGCTG CCGGGTGGTG
GCGGTCCTGG GCACGGCCCC CGCGGACGAG TTGGTCGGGG CCGAGCTGAT CGTGGACGCA
CTGGACCGGC TGACCGTGGT GCCGCACGGA TCGGCGCTGC GGTTGGCCGC CACCGGCTGA
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| Protein sequence | MALAQELGLP VLDLDTLTNP LLDALPVSLL AEHWLSPAHG TAVRDGRYAA LRAVAAQVVA
TAGGAVLVAP FTAELAGGDA WVRLRTALAP TDPLVVWIRG DAELFARRRG QRAAERDRHR
PDGPAPVPPA VDHLAVDADL TTAQQVFRVR RALGDRIPVA PDAPILGLDV DALLFDLDGT
LADSTASVAR CWDRLAREFG AAPALVQANH GQPADVLVGK LVGPDPQAAG RARIRQLEIE
DAPSIDRIPG AAELFSSVPE SRRAIVTSGV RELAAARLRA AGLPIPATMV TFDDVMRGKP
DPEPYLLAAS RLGVDPARCL VFEDAPAGIA SARAAGCRVV AVLGTAPADE LVGAELIVDA
LDRLTVVPHG SALRLAATG
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