More than 300 homologs were found in PanDaTox collection
for query gene Francci3_2637 on replicon NC_007777
Organism: Frankia sp. CcI3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_2637  HAD family hydrolase  100 
 
 
286 aa  550  1e-156  Frankia sp. CcI3  Bacteria  normal  0.403398  normal  0.292856 
 
 
-
 
NC_009921  Franean1_4889  HAD family hydrolase  75.53 
 
 
233 aa  258  6e-68  Frankia sp. EAN1pec  Bacteria  normal  0.351284  normal  0.0730929 
 
 
-
 
NC_013510  Tcur_2293  HAD-superfamily hydrolase, subfamily IA, variant 3  53.76 
 
 
218 aa  167  2e-40  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.0000494788  n/a   
 
 
-
 
NC_013093  Amir_2212  HAD-superfamily hydrolase, subfamily IA, variant 3  45.6 
 
 
220 aa  156  3e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_22200  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  45.99 
 
 
217 aa  154  2e-36  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.172111  normal 
 
 
-
 
NC_014165  Tbis_1853  HAD-superfamily hydrolase  46.32 
 
 
213 aa  152  7e-36  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2412  HAD-superfamily hydrolase, subfamily IA, variant 3  47.03 
 
 
222 aa  150  2e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4498  HAD-superfamily hydrolase subfamily IA, variant 3  40.74 
 
 
223 aa  150  2e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.511661  normal  0.0143777 
 
 
-
 
NC_013595  Sros_5916  HAD family hydrolase  47.12 
 
 
218 aa  146  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0345843  normal  0.0351614 
 
 
-
 
NC_009380  Strop_2232  HAD family hydrolase  47.93 
 
 
233 aa  139  3.9999999999999997e-32  Salinispora tropica CNB-440  Bacteria  normal  0.470588  normal 
 
 
-
 
NC_009953  Sare_2349  HAD family hydrolase  46.11 
 
 
215 aa  139  7e-32  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.355354 
 
 
-
 
NC_007333  Tfu_1824  HAD family hydrolase  46.75 
 
 
222 aa  137  2e-31  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1843  HAD-superfamily hydrolase, subfamily IA, variant 3  46.81 
 
 
241 aa  135  9.999999999999999e-31  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.101722  normal 
 
 
-
 
NC_013235  Namu_2787  HAD-superfamily hydrolase, subfamily IA, variant 3  44.56 
 
 
230 aa  135  9.999999999999999e-31  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00137861  hitchhiker  0.0000132599 
 
 
-
 
NC_013441  Gbro_2452  HAD-superfamily hydrolase, subfamily IA, variant 3  45.36 
 
 
232 aa  131  1.0000000000000001e-29  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2245  HAD-superfamily hydrolase, subfamily IA, variant 3  43.44 
 
 
247 aa  129  4.0000000000000003e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.56873  normal 
 
 
-
 
NC_008699  Noca_2632  HAD family hydrolase  40.64 
 
 
218 aa  128  1.0000000000000001e-28  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1175  HAD family hydrolase  44.62 
 
 
263 aa  126  4.0000000000000003e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_13910  haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED  44.1 
 
 
232 aa  123  3e-27  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.491881  normal 
 
 
-
 
NC_013595  Sros_7385  HAD-superfamily hydrolase, subfamily IA  41.43 
 
 
248 aa  122  5e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1550  HAD-superfamily hydrolase, subfamily IA, variant 3  38.62 
 
 
249 aa  122  5e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.204001 
 
 
-
 
NC_014158  Tpau_2146  HAD-superfamily hydrolase, subfamily IA, variant 3  37.89 
 
 
213 aa  121  9.999999999999999e-27  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3148  HAD family hydrolase  40.76 
 
 
228 aa  120  1.9999999999999998e-26  Mycobacterium sp. MCS  Bacteria  normal  0.0274068  n/a   
 
 
-
 
NC_009077  Mjls_3160  HAD family hydrolase  40.76 
 
 
228 aa  120  1.9999999999999998e-26  Mycobacterium sp. JLS  Bacteria  normal  0.0720917  normal  0.533727 
 
 
-
 
NC_008705  Mkms_3210  HAD family hydrolase  40.76 
 
 
228 aa  120  1.9999999999999998e-26  Mycobacterium sp. KMS  Bacteria  normal  0.742759  normal  0.278604 
 
 
-
 
NC_008726  Mvan_3473  HAD family hydrolase  38.14 
 
 
243 aa  120  1.9999999999999998e-26  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_3054  HAD family hydrolase  37.43 
 
 
224 aa  117  1.9999999999999998e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.751068  normal  0.223571 
 
 
-
 
NC_014151  Cfla_2008  HAD-superfamily hydrolase, subfamily IA, variant 3  43.72 
 
 
213 aa  113  4.0000000000000004e-24  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.296794  normal 
 
 
-
 
NC_013521  Sked_20940  haloacid dehalogenase superfamily enzyme, subfamily IA  40.43 
 
 
273 aa  113  5e-24  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.650807 
 
 
-
 
NC_013757  Gobs_2673  HAD-superfamily hydrolase, subfamily IA, variant 3  41.34 
 
 
248 aa  108  1e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.649761  n/a   
 
 
-
 
NC_013530  Xcel_1481  HAD-superfamily hydrolase, subfamily IA, variant 3  40.98 
 
 
233 aa  107  2e-22  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3346  HAD family hydrolase  38.66 
 
 
221 aa  107  3e-22  Caulobacter sp. K31  Bacteria  normal  0.363754  normal 
 
 
-
 
NC_009012  Cthe_3073  HAD family hydrolase  37.11 
 
 
223 aa  106  4e-22  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00582956  n/a   
 
 
-
 
NC_010816  BLD_1305  beta-phosphoglucomutase  35.86 
 
 
223 aa  106  4e-22  Bifidobacterium longum DJO10A  Bacteria  normal  0.396501  n/a   
 
 
-
 
NC_011886  Achl_1913  HAD-superfamily hydrolase, subfamily IA, variant 3  37.11 
 
 
245 aa  102  9e-21  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000000014808 
 
 
-
 
NC_007492  Pfl01_1752  HAD family hydrolase  38.66 
 
 
232 aa  101  1e-20  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_0935  HAD family hydrolase  36.51 
 
 
235 aa  100  3e-20  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.941543  normal 
 
 
-
 
NC_009997  Sbal195_4047  2-deoxyglucose-6-phosphatase  35.6 
 
 
219 aa  100  3e-20  Shewanella baltica OS195  Bacteria  hitchhiker  0.0000965281  normal  0.234971 
 
 
-
 
NC_009901  Spea_0424  2-deoxyglucose-6-phosphatase  32.83 
 
 
222 aa  100  4e-20  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0780  HAD family hydrolase  35.75 
 
 
227 aa  99.8  4e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_1634  HAD-superfamily hydrolase, subfamily IA, variant 3  35.98 
 
 
221 aa  99.8  4e-20  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0501975  n/a   
 
 
-
 
NC_008577  Shewana3_0432  2-deoxyglucose-6-phosphatase  35.26 
 
 
218 aa  99.8  5e-20  Shewanella sp. ANA-3  Bacteria  unclonable  0.00000000498152  normal 
 
 
-
 
NC_013172  Bfae_25290  haloacid dehalogenase superfamily enzyme, subfamily IA  36.51 
 
 
244 aa  98.2  1e-19  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0218735  n/a   
 
 
-
 
NC_009438  Sputcn32_3410  2-deoxyglucose-6-phosphatase  34.03 
 
 
217 aa  97.8  2e-19  Shewanella putrefaciens CN-32  Bacteria  normal  0.0110715  n/a   
 
 
-
 
NC_008322  Shewmr7_3593  2-deoxyglucose-6-phosphatase  34.74 
 
 
218 aa  97.8  2e-19  Shewanella sp. MR-7  Bacteria  unclonable  0.0000011766  normal  0.672534 
 
 
-
 
NC_007005  Psyr_5006  HAD family hydrolase  38.02 
 
 
229 aa  97.1  3e-19  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_4825  HAD-superfamily hydrolase, subfamily IA, variant 3  33.68 
 
 
224 aa  96.7  4e-19  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0431  2-deoxyglucose-6-phosphatase  34.74 
 
 
217 aa  95.9  6e-19  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_1912  2-deoxyglucose-6-phosphatase  34.87 
 
 
223 aa  95.5  9e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0120822  n/a   
 
 
-
 
NC_010717  PXO_03084  HAD superfamily hydrolase  41.36 
 
 
226 aa  95.1  1e-18  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3772  2-deoxyglucose-6-phosphatase  32.46 
 
 
218 aa  95.1  1e-18  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3425  2-deoxyglucose-6-phosphatase  33.86 
 
 
223 aa  95.1  1e-18  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000919178  normal 
 
 
-
 
NC_009456  VC0395_0037  haloacid dehalogenase/epoxide hydrolase family protein  33.68 
 
 
219 aa  94.4  2e-18  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0452  HAD family hydrolase  33.51 
 
 
221 aa  94.4  2e-18  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_2125  2-deoxyglucose-6-phosphatase  34.05 
 
 
221 aa  94.4  2e-18  Serratia proteamaculans 568  Bacteria  normal  0.0177126  hitchhiker  0.00144451 
 
 
-
 
NC_013421  Pecwa_2205  2-deoxyglucose-6-phosphatase  35.42 
 
 
221 aa  93.6  3e-18  Pectobacterium wasabiae WPP163  Bacteria  normal  0.100097  n/a   
 
 
-
 
NC_013174  Jden_1197  HAD-superfamily hydrolase, subfamily IA, variant 3  33.33 
 
 
225 aa  93.2  4e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  0.0955551  normal  0.148864 
 
 
-
 
NC_011899  Hore_10160  HAD-superfamily hydrolase, subfamily IA, variant 3  33.87 
 
 
217 aa  92  1e-17  Halothermothrix orenii H 168  Bacteria  normal  0.64096  n/a   
 
 
-
 
NC_009784  VIBHAR_05174  phosphoglycolate phosphatase  32.64 
 
 
256 aa  91.7  1e-17  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_0680  HAD family hydrolase  30.96 
 
 
227 aa  91.7  1e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0123656 
 
 
-
 
NC_003909  BCE_4276  HAD superfamily hydrolase  31.05 
 
 
220 aa  90.9  2e-17  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_3281  HAD family hydrolase  39.9 
 
 
221 aa  90.9  2e-17  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013457  VEA_001299  CbbY family protein  33.68 
 
 
216 aa  91.3  2e-17  Vibrio sp. Ex25  Bacteria  normal  0.916657  n/a   
 
 
-
 
NC_007434  BURPS1710b_1218  putative hydrolase  36.51 
 
 
762 aa  90.5  3e-17  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1808  2-deoxyglucose-6-phosphatase  34.03 
 
 
221 aa  90.1  4e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.417032  n/a   
 
 
-
 
NC_013721  HMPREF0424_1278  HAD hydrolase, family IA, variant 3  30.93 
 
 
247 aa  89.7  4e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009708  YpsIP31758_1697  2-deoxyglucose-6-phosphatase  34.03 
 
 
221 aa  90.1  4e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_0479  HAD family hydrolase  38.34 
 
 
225 aa  89.7  5e-17  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1060  haloacid dehalogenase, IA family protein  36.51 
 
 
224 aa  89.7  6e-17  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1566  HAD family hydrolase  32.04 
 
 
216 aa  89.4  6e-17  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1609  HAD-superfamily hydrolase  36.51 
 
 
224 aa  89.7  6e-17  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0717  HAD-superfamily hydrolase  36.51 
 
 
224 aa  89.7  6e-17  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2296  HAD-superfamily hydrolase  36.51 
 
 
224 aa  89.7  6e-17  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2990  HAD-superfamily hydrolase  36.51 
 
 
224 aa  89.7  6e-17  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1517  HAD family hydrolase  32.04 
 
 
216 aa  89  8e-17  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1066  haloacid dehalogenase, IA family protein  35.98 
 
 
224 aa  89  8e-17  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_2267  HAD-superfamily hydrolase, subfamily IA, variant 3  33.16 
 
 
219 aa  89  8e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1040  HAD family hydrolase  33.69 
 
 
226 aa  88.6  1e-16  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00000171478  n/a   
 
 
-
 
NC_013205  Aaci_2469  HAD-superfamily hydrolase, subfamily IA, variant 3  34.57 
 
 
224 aa  88.2  1e-16  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.618161  n/a   
 
 
-
 
NC_011369  Rleg2_0846  HAD-superfamily hydrolase, subfamily IA, variant 3  35.27 
 
 
231 aa  88.6  1e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.814852 
 
 
-
 
NC_013132  Cpin_5088  beta-phosphoglucomutase  34.36 
 
 
219 aa  88.2  1e-16  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00016924  normal  0.408522 
 
 
-
 
NC_009654  Mmwyl1_0641  HAD family hydrolase  30.09 
 
 
220 aa  88.2  1e-16  Marinomonas sp. MWYL1  Bacteria  normal  0.950078  normal  0.0427696 
 
 
-
 
NC_007604  Synpcc7942_1351  HAD family hydrolase  34.39 
 
 
236 aa  88.2  1e-16  Synechococcus elongatus PCC 7942  Bacteria  decreased coverage  0.00941248  normal 
 
 
-
 
NC_008321  Shewmr4_0436  2-deoxyglucose-6-phosphatase  34.74 
 
 
218 aa  88.6  1e-16  Shewanella sp. MR-4  Bacteria  unclonable  0.0000000024214  normal 
 
 
-
 
NC_013174  Jden_2195  HAD-superfamily hydrolase, subfamily IA, variant 3  37.75 
 
 
224 aa  88.2  1e-16  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_2690  HAD family hydrolase  29.9 
 
 
221 aa  88.6  1e-16  Flavobacterium johnsoniae UW101  Bacteria  normal  0.365385  n/a   
 
 
-
 
NC_008700  Sama_0381  2-deoxyglucose-6-phosphatase  32.28 
 
 
221 aa  88.2  1e-16  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0071153  normal  0.324571 
 
 
-
 
NC_010513  Xfasm12_0542  hydrolase  38.34 
 
 
225 aa  87.8  2e-16  Xylella fastidiosa M12  Bacteria  normal  0.491879  n/a   
 
 
-
 
NC_008009  Acid345_3787  HAD family hydrolase  35.9 
 
 
238 aa  87.8  2e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.85061  normal 
 
 
-
 
NC_009665  Shew185_3926  2-deoxyglucose-6-phosphatase  31.41 
 
 
219 aa  87.4  2e-16  Shewanella baltica OS185  Bacteria  hitchhiker  0.00000000238408  n/a   
 
 
-
 
NC_011725  BCB4264_A4313  hydrolase, haloacid dehalogenase-like family  33.33 
 
 
235 aa  87.8  2e-16  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3945  HAD superfamily hydrolase  31.22 
 
 
221 aa  87  3e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3956  HAD superfamily hydrolase  31.75 
 
 
220 aa  87  3e-16  Bacillus cereus E33L  Bacteria  normal  0.945579  n/a   
 
 
-
 
NC_009052  Sbal_3906  2-deoxyglucose-6-phosphatase  31.41 
 
 
219 aa  87  3e-16  Shewanella baltica OS155  Bacteria  unclonable  0.000000000443869  n/a   
 
 
-
 
NC_011663  Sbal223_3849  2-deoxyglucose-6-phosphatase  31.44 
 
 
219 aa  87  3e-16  Shewanella baltica OS223  Bacteria  normal  0.184484  hitchhiker  0.000000000456944 
 
 
-
 
NC_007954  Sden_3378  2-deoxyglucose-6-phosphatase  30 
 
 
225 aa  87  3e-16  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0110  HAD family hydrolase  36.56 
 
 
227 aa  87  3e-16  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET0395  glycoprotease family protein/hydrolase, beta-phosphoglucomutase family  32.98 
 
 
456 aa  86.7  4e-16  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_2523  HAD family hydrolase  32.84 
 
 
219 aa  86.7  4e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.000000000119514  n/a   
 
 
-
 
NC_011773  BCAH820_4222  hydrolase, haloacid dehalogenase-like family  31.22 
 
 
220 aa  87  4e-16  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>