Gene Mflv_3054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3054 
Symbol 
ID4974375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3236867 
End bp3237541 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID640457277 
ProductHAD family hydrolase 
Protein accessionYP_001134319 
Protein GI145223641 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.751068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.223571 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGTGGG ATATGGACGG AACCCTCGTC GATTCCGAAA AGCTGTGGGA TGTATCACTT 
TCCAAGCTCT ACGAGACCTA CGACGCCGAG ATGAGCCGCG AGACGCGCAC TGCCCTGGTG
GGAGCTTCGG CCGAAGAGAC GATGGTGACC GTCTACACCG AGCTCGGGCT CGATCTCGAC
CCGGCGGCGA TGGCCGAGTC CATCCGGTGG CTGCACGCGC ACACTGCCGA ACTGTTCGAC
GAGGGTCTGC CGTGGTGTGA CGGCGCCTTC GAGTTGCTGG AACGCCTTGT GGCCGAGGGT
ACTCCGATGG CGCTGGTGAC CAACACCAAC CGTCATCTCG CCGATCGCGC ACTGGAAAGT
ATTGGACGCC ACTACTTCTC GTTCACGGTG TGCGGCGACG AGGTGCCAAG GGGCAAGCCC
GCGCCCGATC CGTACCTGCG GGCGGCCGAG CTGCTCGCCC TGGACCCGTC GGACTGCCTC
GCCGTCGAGG ACTCGGTGAC CGGGACCGCC GCAGCCGAGC GGGCGGGATG CGCGGTGCTC
GTGGTTCCCA ACGACGTTCC GGTGCCCGGC GGTCTGCGTC GACGCCACGT GCAGACTCTG
GCAGACCTCG GCCCGGCCGA TCTGCGGCGC ATCCACGCGG AGATCACCCG CGAACTCGGC
GAGCGCACCG CCTGA
 
Protein sequence
MLWDMDGTLV DSEKLWDVSL SKLYETYDAE MSRETRTALV GASAEETMVT VYTELGLDLD 
PAAMAESIRW LHAHTAELFD EGLPWCDGAF ELLERLVAEG TPMALVTNTN RHLADRALES
IGRHYFSFTV CGDEVPRGKP APDPYLRAAE LLALDPSDCL AVEDSVTGTA AAERAGCAVL
VVPNDVPVPG GLRRRHVQTL ADLGPADLRR IHAEITRELG ERTA