| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_1824 |
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| Symbol | |
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| ID | 3579115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 2126341 |
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| End bp | 2127009 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637685516 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_289880 |
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| Protein GI | 72162223 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTTG AGCAGCAACT TCCGCAGGCG GTGCTGTTCG ATATGGACGG CACGCTGATC
GACACCGAGC CGCTGTGGAT CGCCACGGAG GCCGAGGTCG CCGCCGAACT CGGCTGTACC
ACGTGGACGG TCGAGGACCA GCGGCGCTGC TTGGGGAGCT CCGCGGCGAT GGTGGCCTCC
TACATCGCTG AGCGCTCGGG GACGTCGGTT CCGCAGAGTG AGATCGTCAC CATGCTGTAC
ACGTCGGTGG CGCGGCGGAT GGCCGACAGT CCCCCCGTGC AGCCGGGCGC TAAGGAGCTG
CTCAGCGAAC TGGATGCCCT GGGGGTGCCG ATGGCGCTGG TCACTTCCAC GTACCGGTCG
CTGCTGGGCA CGGCACTGCG CGGTCTGGGG GAGCACTATT TCGCGGCGAC GGTGGCCGGG
GACGAAGTGT CCCAGGCCAA GCCGCACCCG GAGCCTTATC TCACGGCGGC ACGCCTGCTG
GGTGTGGATC CGCGCCGCTG TGTGGCGGTG GAGGATTCGC CCGCTGGCGT GGCTGCGGCC
CAAGCCGCAG GGTGTGTCGT GGTCGCGGTG CCGCATGTGG CTCCGATCGA GGAGGCGGAG
CGGCGGTATG TGGTCTCTTC CCTGACGGAG ATCAGCGTGG ACTGGCTACG ACAAGTGGTC
AACTCGTGA
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| Protein sequence | MTVEQQLPQA VLFDMDGTLI DTEPLWIATE AEVAAELGCT TWTVEDQRRC LGSSAAMVAS
YIAERSGTSV PQSEIVTMLY TSVARRMADS PPVQPGAKEL LSELDALGVP MALVTSTYRS
LLGTALRGLG EHYFAATVAG DEVSQAKPHP EPYLTAARLL GVDPRRCVAV EDSPAGVAAA
QAAGCVVVAV PHVAPIEEAE RRYVVSSLTE ISVDWLRQVV NS
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