Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_1478 |
Symbol | |
ID | 5334281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009664 |
Strand | - |
Start bp | 737864 |
End bp | 738526 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
Protein accession | YP_001361230 |
Protein GI | 152965446 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0104021 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.265718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTCCCC GCGTCCTGGA CCGCCCGTTC GCCGCGATCC TCTTCGACAT GGACGGCACG CTGGTGGACT CCACCGCGGC CATCGACCGC AGCTGGACGA CCTGGGCCGT CGAGCACGGG GTCTCCCGCG CCGCGCTCGT GGCCGCGGCG GGCCACGGCC GGCCCGCCCC CGAGATCGTC GCCGACCTCG TCGGGCCCGA GCGCGCCGCC GCCGCCTCCG CGCGCATCAC CGAGCTGGAG GTCGACGACG TCGGCGGCGT CGTGCAGCTG CCCGGGGTCG CGGACCTGCT GGCCGGCCTG CCCCGCGAGC GCTGGGCGAT CGTCACGTCC TGCTCGGCGC CGCTGGCCGA CGCCCGCCGC ACCGCGGCGG GGCTGCCCGA GCCGTCGGTG CTGGTGACCT TCGACGACGT CGAGCGCGGC AAGCCCGCCC CGGACTGCTT CCTGCTCGGG GCCCGGCGCC TGGGGGTCGA CCCCGCCGAC TGCCTCGTCG TGGAGGACGC CCCGGCCGGG CTGACCGCCG CGCGCGCCGC GGGCTGCGCG ACGCTCGCCG TGCGCACCAC CCACCCCGAG GGCCCGCTGG CGGCCGACCT CGTCGTCCGG CTCCTCTCCG AGGTCGCCAT CACCCCCGGC GAGGGGGGCC TGCGGGTCTC GACCCGGGGG TGA
|
Protein sequence | MTPRVLDRPF AAILFDMDGT LVDSTAAIDR SWTTWAVEHG VSRAALVAAA GHGRPAPEIV ADLVGPERAA AASARITELE VDDVGGVVQL PGVADLLAGL PRERWAIVTS CSAPLADARR TAAGLPEPSV LVTFDDVERG KPAPDCFLLG ARRLGVDPAD CLVVEDAPAG LTAARAAGCA TLAVRTTHPE GPLAADLVVR LLSEVAITPG EGGLRVSTRG
|
| |