| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1980 |
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| Symbol | |
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| ID | 4252553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2355226 |
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| End bp | 2355834 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638118593 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_734110 |
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| Protein GI | 113970317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000561924 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0500569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATACAG AATTTGACGG CATTATCTTC GATATGGATG GCACCTTAGT CGACAGTGGT
CAATTGCATG AGCAGGCATG GCGACAAACC TTGAATCACT TTGGGATCCC CGTAGAGCCT
GCACTGATGC GCTCGTTAGC GGGTGTGCCC ACCATTGGTA CCTTAGAGAT TTTGATCGCC
CATTTTGGCG TCACGCCAAC GGCCAGTTGT GAGGCCATGA ACGAGTATAA AGAAGCCCTA
GTGCGCGACA CTATGCATTT ATATGTCAAA CCGACGGCAT TAGCCGAATT TGCCAAGCAG
AATCAGGGCA AACGCCCAAT GGCGGTCGGC ACAGGCGCCT ACACAGAGGA AGCAATTCAA
ATCTTGACCC TGTGTGGATT GTTGGAATTA GTCGATTATG TGGTGGGCGC CGACCAAGTC
GCGTCACCCA AACCTGCGCC CGATACCTTT TTACGCTGCG CCGAACTGAT GGGCATAGCG
CCTGAGCGCT GTATCGTATT TGAAGATGCG AAGGCGGGCA TCCAAGCCGC CGAAGCTGCG
GGGATGTTTG TGGTCGATGT GCATGCCGAA TTACAGATTG AAAATGACTA TTTCCTAGGC
GCTCAGTAG
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| Protein sequence | MYTEFDGIIF DMDGTLVDSG QLHEQAWRQT LNHFGIPVEP ALMRSLAGVP TIGTLEILIA
HFGVTPTASC EAMNEYKEAL VRDTMHLYVK PTALAEFAKQ NQGKRPMAVG TGAYTEEAIQ
ILTLCGLLEL VDYVVGADQV ASPKPAPDTF LRCAELMGIA PERCIVFEDA KAGIQAAEAA
GMFVVDVHAE LQIENDYFLG AQ
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