Gene Sked_32600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_32600 
Symbol 
ID8634893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp3629121 
End bp3629789 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content75% 
IMG OID 
Producthaloacid dehalogenase superfamily enzyme, subfamily IA 
Protein accessionYP_003315989 
Protein GI269796534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.158524 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTCAC CAGGACTCGC CTTCGCCGAC CGCACCTTCG ACGCGATCCT CTTCGACATG 
GACGGCACGC TCATCAGCTC GATCGAGGCG GTCGACCGCA GCTGGGCGCT CTGGGGCCGC
GAGCACGGGC TCGGCGACGA GTTCCGCATC GCGCACGGCA CGCCCGCACG CTCCCTCGTC
GAGCGGCTGC TGCCCGCCGA GCAGGTCGAG GTGGCCCTCG CCCGGATCAC CGAGATCGAG
CTCGGCGACA CCGACGGCGT CCGGGTGCTG CCCGGCGCGG CCGAGCTGCT CGCCTCGCTG
CCCGCGGAGC GCCACGCGAT CGTCACGTCG TGCACCCGTG ACCTCGCGGC GGTGCGCATC
GCCGCGACCG GGATCGGTGC GCCCGGGGTG GTCGTGACGG CCGACGACAT CTCCCGCGGC
AAGCCCGACC CCGAGCCCTT CCGCCGCGGG GCGGAGCTGC TCGGCTTCGA CCCCGCACGC
TGCCTGGTCG TCGAGGACGC ACCGGCCGGC CTCGAGTCCG GCCGGGCCGC CGGGTGCGCG
ACGCTCGCGG TCGCCGGGAC GCACAGCCTC GACGAGCTGG ACGCCGACGC GCACGCACCG
GGCGTCTGGG CCGTCGCCGT GCGGGTCACC GCGGAGGGGA CGCTCGTCCT CGAAGACCGC
ACGGCCTGA
 
Protein sequence
MLSPGLAFAD RTFDAILFDM DGTLISSIEA VDRSWALWGR EHGLGDEFRI AHGTPARSLV 
ERLLPAEQVE VALARITEIE LGDTDGVRVL PGAAELLASL PAERHAIVTS CTRDLAAVRI
AATGIGAPGV VVTADDISRG KPDPEPFRRG AELLGFDPAR CLVVEDAPAG LESGRAAGCA
TLAVAGTHSL DELDADAHAP GVWAVAVRVT AEGTLVLEDR TA