| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1554 |
|---|
| Symbol | |
|---|
| ID | 6089999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1716729 |
|---|
| End bp | 1717385 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641596624 |
|---|
| Product | putative phosphatase |
|---|
| Protein accession | YP_001720300 |
|---|
| Protein GI | 170023795 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTGTA AAGGTTTTCT TTTTGATTTA GATGGGACGT TGGTTGATTC ACTACCTGTT
GTTGAACGTG CCTGGATTGG CTGGGCGCAA CGTCGAGGCG TTAATCCATC AGAAGTTCTG
GATTTTATTC ATGGTAAACA AGCGATTACC TCTTTGCGTC ATTTTATGCC GGGTGCCAGT
GAAGCTGAAA TTCAGGACGA GTTTCTGGCA TTAGAGCAAA TTGAAGCCAA TGATACGGAG
GGGGTAACTG CGCTACCAGG GGCGGTGGCA CTGTTGACCC GGTTGAATGA ACTGGCTATT
CCGTGGGCGA TAGTGACTTC AGGTTCGATA CCTGTTGCCT CAGCTCGCCG GGCGGCAGGT
TGTTTGCCAG AGCCGAAAGT GTTTGTGACC GCCGAATTGG TGAAGCAGGG TAAACCTGCG
CCCGATGCCT ATTTATTAGG GGCCGAACGT TTAGGCCTTG CCCCTGCGGA TTGTATTGTG
GTGGAAGATG CCCCCGCCGG GATCCTTTCG GGGCTAGCGG CCGGTTGTCA GGTGATCGCG
GTTAATGCAC CAACAGATAC CCCAAAACTC GATCAGGTTG ATCTGGTGCT TCACTCACTG
GAGCAATTGG TGGTAGACGC CACTGCTCAT GGTGCGGTGG TTCGGTTACT GCCTTAA
|
|---|
| Protein sequence | MECKGFLFDL DGTLVDSLPV VERAWIGWAQ RRGVNPSEVL DFIHGKQAIT SLRHFMPGAS
EAEIQDEFLA LEQIEANDTE GVTALPGAVA LLTRLNELAI PWAIVTSGSI PVASARRAAG
CLPEPKVFVT AELVKQGKPA PDAYLLGAER LGLAPADCIV VEDAPAGILS GLAAGCQVIA
VNAPTDTPKL DQVDLVLHSL EQLVVDATAH GAVVRLLP
|
|---|
| |