Gene Tpau_3077 details

Gene Information

• Locus tag: Tpau_3077
• ID: 9157248
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3192525
• End bp: 3193163
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 72%
• Product: HAD-superfamily hydrolase, subfamily IA, variant 3
• Protein accession: YP_003648008
• Protein GI: 296140765

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.79741
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCACCG GTCGCGCTCT ACTGCTGGAC ATGGACGGCA CGCTGGTCGA TTCGCACGCC 
GTGGTGGAGC GGTGCTGGAC CCGATGGGCA CGGGAGAAGG GCCTCGATCC CGCTCAGGTG 
CTGGCCGTCG CGCACGGCCG GCAGGGCCAC GCCACGATGG CGCAATTGCT GCCGGATCGC 
CCCGTCGAGG TCAATCTCGC AGAGAACCGT GCACTGCTCG CGCAGGAGAC CGCCGACACC 
GAGGGCATCG TCCCCATTGC CGGCGCGCCC GCCTTCCTCG CCGCGCTCGA CGGTGCGCCG 
CACGCCCTGG TGACCTCCGC GGACGTCGCA CTGTCGACGG CGCGCATGAG CGCGGCGGGT 
CTACCTCTGC CGGCGGTCCG GGTGACCGCC GAAGACGTGC GCGCCAGCAA ACCCGACCCG 
GAGGGTTTTC TCCGTGGCGC CGCGCTCCTC GGGGTCGCTC CCGCCGACTG CATCGTCTTC 
GAGGACTCGG AGGCCGGTAT CGCCGCAGCC AAGGCCGCCG GAATGCGGGT GGTCGGGGTG 
GGCGCGCAGG CGGCGCGCCT GTCTCCCGAC GCGCAGGTGG ACGACCTGAC CGGGGTCGGC 
GTCACCGTCG ATGACGCGGG TATTCACGTG CGCCTCTGA 

 

Protein sequence

MLTGRALLLD MDGTLVDSHA VVERCWTRWA REKGLDPAQV LAVAHGRQGH ATMAQLLPDR 
PVEVNLAENR ALLAQETADT EGIVPIAGAP AFLAALDGAP HALVTSADVA LSTARMSAAG 
LPLPAVRVTA EDVRASKPDP EGFLRGAALL GVAPADCIVF EDSEAGIAAA KAAGMRVVGV 
GAQAARLSPD AQVDDLTGVG VTVDDAGIHV RL