More than 300 homologs were found in PanDaTox collection
for query gene Mrad2831_5658 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_5658  response regulator receiver protein  100 
 
 
132 aa  261  2e-69  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.483341  normal 
 
 
-
 
NC_010511  M446_0185  response regulator receiver protein  76.98 
 
 
132 aa  198  1.9999999999999998e-50  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2799  response regulator receiver protein  76 
 
 
132 aa  194  4.0000000000000005e-49  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_5294  response regulator receiver protein  67.69 
 
 
130 aa  174  4e-43  Methylobacterium sp. 4-46  Bacteria  normal  0.0717946  normal  0.338735 
 
 
-
 
NC_013730  Slin_5022  response regulator receiver protein  52.5 
 
 
126 aa  119  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1111  response regulator receiver protein  53.1 
 
 
123 aa  117  3.9999999999999996e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0272953  normal  0.304596 
 
 
-
 
NC_013730  Slin_5021  adenylate/guanylate cyclase  37.98 
 
 
348 aa  97.1  7e-20  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5657  adenylate/guanylate cyclase  43.55 
 
 
421 aa  95.1  2e-19  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.517681  normal 
 
 
-
 
NC_013730  Slin_4603  response regulator receiver protein  48.62 
 
 
132 aa  94  6e-19  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1110  adenylate/guanylate cyclase  38.76 
 
 
348 aa  91.3  4e-18  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.0224811  normal  0.236606 
 
 
-
 
NC_010511  M446_2796  adenylate/guanylate cyclase  39.84 
 
 
447 aa  85.9  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_0615  response regulator receiver sensor signal transduction histidine kinase  40.31 
 
 
395 aa  85.9  2e-16  Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.00858549 
 
 
-
 
NC_010511  M446_5293  adenylate/guanylate cyclase  41.18 
 
 
421 aa  85.1  3e-16  Methylobacterium sp. 4-46  Bacteria  normal  0.0545376  normal  0.227088 
 
 
-
 
NC_013730  Slin_6047  response regulator receiver sensor hybrid histidine kinase  38.66 
 
 
677 aa  78.2  0.00000000000003  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_4604  histidine kinase  35.77 
 
 
663 aa  78.2  0.00000000000004  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2738  response regulator receiver domain-containing protein  41.82 
 
 
194 aa  77  0.00000000000007  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.000186206  n/a   
 
 
-
 
NC_013730  Slin_1905  response regulator receiver sensor hybrid histidine kinase  35.29 
 
 
668 aa  77  0.00000000000008  Spirosoma linguale DSM 74  Bacteria  normal  0.0295515  normal  0.210974 
 
 
-
 
NC_013440  Hoch_2281  response regulator receiver protein  38.26 
 
 
128 aa  75.9  0.0000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.498531 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  40.46 
 
 
328 aa  75.5  0.0000000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  37.01 
 
 
469 aa  72  0.000000000002  Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_013216  Dtox_2959  two component, sigma54 specific, transcriptional regulator, Fis family  36.61 
 
 
513 aa  72.4  0.000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1294  DNA-binding response regulator  37.04 
 
 
180 aa  72  0.000000000003  Dehalococcoides ethenogenes 195  Bacteria  unclonable  0.00000125664  n/a   
 
 
-
 
NC_013173  Dbac_0628  two component, sigma54 specific, transcriptional regulator, Fis family  40.91 
 
 
446 aa  71.6  0.000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4841  response regulator receiver protein  40.35 
 
 
118 aa  72  0.000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.202718  n/a   
 
 
-
 
NC_004578  PSPTO_0823  type 4 fimbriae expression regulatory protein pilR  36.15 
 
 
446 aa  71.2  0.000000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_6017  PAS/PAC sensor hybrid histidine kinase  38.58 
 
 
1044 aa  71.2  0.000000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0722  helix-turn-helix, Fis-type  37.1 
 
 
445 aa  70.9  0.000000000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009455  DehaBAV1_1106  response regulator receiver protein  35.51 
 
 
180 aa  70.1  0.000000000009  Dehalococcoides sp. BAV1  Bacteria  normal  0.0674112  n/a   
 
 
-
 
NC_013552  DhcVS_1078  DNA-binding response regulator  35.51 
 
 
180 aa  70.1  0.000000000009  Dehalococcoides sp. VS  Bacteria  unclonable  0.00000000000063084  n/a   
 
 
-
 
NC_010424  Daud_2177  response regulator receiver protein  36.51 
 
 
120 aa  70.1  0.00000000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0847  two component diguanylate cyclase  39.34 
 
 
327 aa  69.7  0.00000000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  33.61 
 
 
123 aa  69.7  0.00000000001  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  38.32 
 
 
472 aa  70.1  0.00000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0965  two-component response regulator PilR  39.13 
 
 
446 aa  68.9  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.25964  normal 
 
 
-
 
NC_007492  Pfl01_4840  two-component response regulator PilR  38.26 
 
 
448 aa  68.9  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.43512  normal  0.760188 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 
470 aa  68.6  0.00000000002  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_013552  DhcVS_565  response regulator receiver:metal-dependent phosphohydrolase, HD subdomain protein  34.68 
 
 
334 aa  68.6  0.00000000003  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  33.88 
 
 
127 aa  68.2  0.00000000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  35.77 
 
 
470 aa  68.2  0.00000000003  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_013173  Dbac_2650  response regulator receiver protein  35.96 
 
 
120 aa  68.6  0.00000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2980  response regulator receiver protein  35.29 
 
 
138 aa  68.6  0.00000000003  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  35.38 
 
 
337 aa  68.6  0.00000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_013132  Cpin_0986  response regulator receiver protein  29.27 
 
 
143 aa  68.2  0.00000000004  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  37.01 
 
 
379 aa  67.8  0.00000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  34.92 
 
 
456 aa  68.2  0.00000000004  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  34.92 
 
 
456 aa  68.2  0.00000000004  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_008577  Shewana3_3334  response regulator receiver modulated metal dependent phosphohydrolase  36.15 
 
 
331 aa  68.2  0.00000000004  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  36.29 
 
 
319 aa  68.2  0.00000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4621  adenylate/guanylate cyclase  30.58 
 
 
687 aa  67.8  0.00000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.828122 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  35.45 
 
 
470 aa  67.4  0.00000000006  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_003296  RSp1409  putative chemotaxis response regulator transcription regulator protein  38.74 
 
 
137 aa  67.4  0.00000000006  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.265627 
 
 
-
 
NC_002947  PP_3419  two component, sigma54 specific, transcriptional regulator, Fis family  36.22 
 
 
475 aa  67  0.00000000007  Pseudomonas putida KT2440  Bacteria  normal  0.0592604  normal  0.514799 
 
 
-
 
NC_014248  Aazo_2338  GAF sensor-containing adenylate/guanylate cyclase  38.79 
 
 
1180 aa  67  0.00000000007  'Nostoc azollae' 0708  Bacteria  normal  0.0263037  n/a   
 
 
-
 
NC_007908  Rfer_2735  response regulator receiver domain-containing protein  38.3 
 
 
242 aa  67  0.00000000007  Rhodoferax ferrireducens T118  Bacteria  normal  0.284606  n/a   
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  36.15 
 
 
331 aa  67  0.00000000007  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3231  response regulator receiver modulated metal dependent phosphohydrolase  36.15 
 
 
331 aa  67  0.00000000007  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1796  PAS/PAC sensor hybrid histidine kinase  34.68 
 
 
871 aa  67  0.00000000007  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000183002  normal 
 
 
-
 
NC_010322  PputGB1_2506  histidine kinase  35.83 
 
 
538 aa  67  0.00000000008  Pseudomonas putida GB-1  Bacteria  normal  0.971833  normal 
 
 
-
 
NC_013889  TK90_2124  two component, sigma54 specific, transcriptional regulator, Fis family  34.43 
 
 
474 aa  67  0.00000000008  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0345179 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  36.45 
 
 
471 aa  67  0.00000000008  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  32.8 
 
 
441 aa  66.2  0.0000000001  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_002936  DET0624  response regulator  33.87 
 
 
334 aa  66.2  0.0000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  32.8 
 
 
441 aa  66.6  0.0000000001  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_009512  Pput_2343  two component, sigma54 specific, Fis family transcriptional regulator  36.22 
 
 
475 aa  66.6  0.0000000001  Pseudomonas putida F1  Bacteria  normal  0.835742  normal 
 
 
-
 
NC_013173  Dbac_1417  response regulator receiver protein  36.84 
 
 
120 aa  66.2  0.0000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.212789  n/a   
 
 
-
 
NC_007298  Daro_3758  helix-turn-helix, Fis-type:nitrogen regulation protein NR(I)  38.53 
 
 
476 aa  66.6  0.0000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.349567 
 
 
-
 
NC_007760  Adeh_0922  two component, sigma54 specific, Fis family transcriptional regulator  36.94 
 
 
462 aa  66.2  0.0000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.554455  n/a   
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  32.8 
 
 
441 aa  66.6  0.0000000001  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_009523  RoseRS_2844  multi-sensor hybrid histidine kinase  31.5 
 
 
657 aa  66.6  0.0000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.389478  normal 
 
 
-
 
NC_009656  PSPA7_5187  two-component response regulator PilR  37.39 
 
 
445 aa  66.6  0.0000000001  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  39.52 
 
 
331 aa  66.6  0.0000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_60260  two-component response regulator PilR  37.39 
 
 
445 aa  66.6  0.0000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.000000831057 
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  32.8 
 
 
441 aa  66.2  0.0000000001  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  38.05 
 
 
1139 aa  66.6  0.0000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  32.8 
 
 
441 aa  66.2  0.0000000001  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_009253  Dred_3178  response regulator receiver protein  37.27 
 
 
135 aa  66.6  0.0000000001  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00591737  n/a   
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  30.71 
 
 
120 aa  66.2  0.0000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  32.8 
 
 
441 aa  65.9  0.0000000002  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_010465  YPK_2907  two component, sigma54 specific, Fis family transcriptional regulator  35.25 
 
 
454 aa  65.9  0.0000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_2521  two component, sigma54 specific, Fis family transcriptional regulator  36.22 
 
 
475 aa  65.5  0.0000000002  Pseudomonas putida GB-1  Bacteria  normal  normal  0.0633509 
 
 
-
 
NC_012857  Rpic12D_4159  response regulator receiver protein  37.84 
 
 
137 aa  65.9  0.0000000002  Ralstonia pickettii 12D  Bacteria  normal  0.174794  normal 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  32.8 
 
 
441 aa  65.9  0.0000000002  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_007498  Pcar_1411  FOG: CheY-like receiver  37.27 
 
 
131 aa  65.9  0.0000000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  6.19514e-17  n/a   
 
 
-
 
NC_013440  Hoch_6827  response regulator receiver protein  33.33 
 
 
389 aa  65.9  0.0000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0976  two component, sigma54 specific, transcriptional regulator, Fis family  36.94 
 
 
1079 aa  66.2  0.0000000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0978  two component, sigma54 specific, transcriptional regulator, Fis family  36.94 
 
 
466 aa  65.9  0.0000000002  Anaeromyxobacter sp. K  Bacteria  normal  0.0932912  n/a   
 
 
-
 
NC_013501  Rmar_0513  two component transcriptional regulator, winged helix family  37.29 
 
 
228 aa  65.9  0.0000000002  Rhodothermus marinus DSM 4252  Bacteria  normal  0.985837  n/a   
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  36.92 
 
 
338 aa  65.5  0.0000000002  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  32.8 
 
 
441 aa  65.9  0.0000000002  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  32.8 
 
 
441 aa  65.9  0.0000000002  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  31.71 
 
 
120 aa  65.9  0.0000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_0258  two component, sigma54 specific, Fis family transcriptional regulator  35.25 
 
 
451 aa  65.9  0.0000000002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.667822  normal 
 
 
-
 
NC_010678  Rpic_4047  response regulator receiver protein  37.84 
 
 
137 aa  65.9  0.0000000002  Ralstonia pickettii 12J  Bacteria  normal  0.772934  normal 
 
 
-
 
NC_008576  Mmc1_0781  PAS/PAC sensor hybrid histidine kinase  34.65 
 
 
1101 aa  65.5  0.0000000002  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.114215 
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  38.46 
 
 
331 aa  66.2  0.0000000002  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_009708  YpsIP31758_2820  transcriptional regulatory protein ZraR  35.25 
 
 
454 aa  65.9  0.0000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2585  helix-turn-helix, Fis-type  32.52 
 
 
468 aa  65.1  0.0000000003  Dechloromonas aromatica RCB  Bacteria  normal  0.023304  normal  0.859939 
 
 
-
 
NC_013216  Dtox_3740  response regulator receiver protein  36.84 
 
 
135 aa  65.1  0.0000000003  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.119956  normal 
 
 
-
 
NC_013757  Gobs_4999  response regulator receiver protein  37.19 
 
 
120 aa  65.1  0.0000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0852  GAF sensor hybrid histidine kinase  33.33 
 
 
1055 aa  65.1  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
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