Gene RoseRS_2844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2844 
Symbol 
ID5209813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3550643 
End bp3552616 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content59% 
IMG OID640596441 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_001277163 
Protein GI148656958 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.389478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAGC AGATCACATC CCGTCCAGGA CTCTTTATCG CCGGTTATAC GGCGTTGGCA 
CTGGCGCTCG GTGCGCTGGT CATTGCGCTG CGTGGGTACG ATTTCCTGCT CTTCATTCTA
ATCTGGCCCG TTATTCTAAG CGCCATGCTT GTTCCCTGGC GCATGTACCT GATCCTTATC
GGCATTGGTG TCACAGTGAC GGCGATAACT CTGCCGCTGG TTGTTCCAGA CCTCAACCGA
TCAGCGACAA CAGCGGCAGC TGCCACGACG GCAGCATTCC TGATCTGTGA AAGCGTCTAT
CGTGTCATGC GCCGTCAGCG CGCAATGGCG CGCGCATTGC AGGAGAGCGA AGAGCGATTT
CGCTGCACGT TCGAGCGCGC TCCTGCGCCG ATGGCAATAA CCGATGTTCA CGGTCGTCTG
AAGTGGTTCA ATCAACGTCT CTGCGACGTG CTGGGGTATG AGCGCGATGC GCTCAAGGGA
CGGATGATCA ATGATTTCGC CCACCCCGAA GATCGGCACA TTCGCCTGCA CAGTGCGCTG
ATCGCAGCCA TCGATGGCGA AGCGTCGGTC GAAAAGCGCT ACGTCGCCAG GGATGGTCGA
GAGATCCCTA TGCAGGTCAA AGGAACGCTG ATACGCGACG CGGCTGGCGA ACCGCATGAG
ACTCTGGTGA TTTTTTTCGA TCTGACTGCA CAACGTGAAG CCGAGGCGCA ACGCCTGGCG
GTGGAACGCG CTATGCAGGA AACGCAGCGT CTTGAGAGCA TGGGTACACT GGCAGGCGGG
TTGGCGCACG ATTTCAATAA CCTGTTGTCC GGCATTTTGG GGAATACAAA CCTGGCGCTG
CTCAATATTC CGGCAGACGC GCCAGCGCGC GCGTATCTGG AGCAGGTTGA AATTGCCGCC
CAGCGCGCAG CCGAGATAAC GCGACAGATC CTGGCGTACA CCGGGCGCGG TCAGGTAGCG
CGCGAGGTGA TCGATGTGCG TCATCTGCTC AACGATCTCA AGACACTGCT GGACACCGCT
GCGCCTGCGA CTATTACAAT CAACTATCAG CTCGAACCAG GACCGCTCCC GGTCTGCTTC
GACCGCACAC AATTGCGACA GGTTATTGTC GCGCTGATCC ACAATGCCGT CGATGCGATC
AATGATGACG TGGGACAGAT CACGGTGACG ATAGGTGAGC GCCTGTTCGA TGCAGACCAT
CTGCCGCGCG ACACTGTCGG CGCCGATCTG CGCGCCGGGC GCTACGCAGT CATCGAGGTG
CGCGATACCG GTTGCGGAAT TGACGAGGAT GCGCGGGACC TTCTGTTTGT TCCGTTCTTC
ACAACCAAAA AAGAGAGGCG TGGTCTGGGA CTCGCGGCAA CACTGGGGAT CGTGCGCAGT
CACGGTGGCG CTATTCAGGT GGAAAGCGCT CCTGGACAGG GCAGCGTCTT TCGCGTGTTC
ATTCCGACTG CACAGGAGTA TCCTGAGACG AAGACCGCTC CTGCGGTTAC GATTGTTCAG
TCGCTCGACG ATCAGGCATC TCCGGTCCAA TCTGCGTCTG CGGGTTTCGC CCCTGCTCCC
CCGGTCGATC AACGATCAGC CGCGCATGCA ATGCAGGACC TTGTGCTGAT CGTCGATGAT
GAACCGACGG TGCGTTCGGT GGCGGCGCGC ATGGTCGAAC ATGTGGGTTT CACGACATTG
CAGGCGTCTG ATGGTGTTGC GGGTGTTGAC CTGTTCCGCG CCAATGCCGA CTCGATAGTC
TGTGTCTTGC TCGATGTCTC CATGCCAGGC ATAGGTGGAG CGCAGGCGCT TCAGATGATG
CGCGCCATAC GCCCTGATGC GCCGATTGTG TTGATGAGCG GGTACGCGGG TGAAGAACTG
GCGGAACGTT TTGCGCAACT GCGACCAGAT GGCTTTCTGT ACAAGCCATT CGATATCGCA
GAACTTAAGG CATGCCTGGA GGGAGTGATC CGGAAAGGAG TGCGCGTGGG ATGA
 
Protein sequence
MAQQITSRPG LFIAGYTALA LALGALVIAL RGYDFLLFIL IWPVILSAML VPWRMYLILI 
GIGVTVTAIT LPLVVPDLNR SATTAAAATT AAFLICESVY RVMRRQRAMA RALQESEERF
RCTFERAPAP MAITDVHGRL KWFNQRLCDV LGYERDALKG RMINDFAHPE DRHIRLHSAL
IAAIDGEASV EKRYVARDGR EIPMQVKGTL IRDAAGEPHE TLVIFFDLTA QREAEAQRLA
VERAMQETQR LESMGTLAGG LAHDFNNLLS GILGNTNLAL LNIPADAPAR AYLEQVEIAA
QRAAEITRQI LAYTGRGQVA REVIDVRHLL NDLKTLLDTA APATITINYQ LEPGPLPVCF
DRTQLRQVIV ALIHNAVDAI NDDVGQITVT IGERLFDADH LPRDTVGADL RAGRYAVIEV
RDTGCGIDED ARDLLFVPFF TTKKERRGLG LAATLGIVRS HGGAIQVESA PGQGSVFRVF
IPTAQEYPET KTAPAVTIVQ SLDDQASPVQ SASAGFAPAP PVDQRSAAHA MQDLVLIVDD
EPTVRSVAAR MVEHVGFTTL QASDGVAGVD LFRANADSIV CVLLDVSMPG IGGAQALQMM
RAIRPDAPIV LMSGYAGEEL AERFAQLRPD GFLYKPFDIA ELKACLEGVI RKGVRVG