Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2844 |
Symbol | |
ID | 5209813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 3550643 |
End bp | 3552616 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596441 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_001277163 |
Protein GI | 148656958 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.389478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACAGC AGATCACATC CCGTCCAGGA CTCTTTATCG CCGGTTATAC GGCGTTGGCA CTGGCGCTCG GTGCGCTGGT CATTGCGCTG CGTGGGTACG ATTTCCTGCT CTTCATTCTA ATCTGGCCCG TTATTCTAAG CGCCATGCTT GTTCCCTGGC GCATGTACCT GATCCTTATC GGCATTGGTG TCACAGTGAC GGCGATAACT CTGCCGCTGG TTGTTCCAGA CCTCAACCGA TCAGCGACAA CAGCGGCAGC TGCCACGACG GCAGCATTCC TGATCTGTGA AAGCGTCTAT CGTGTCATGC GCCGTCAGCG CGCAATGGCG CGCGCATTGC AGGAGAGCGA AGAGCGATTT CGCTGCACGT TCGAGCGCGC TCCTGCGCCG ATGGCAATAA CCGATGTTCA CGGTCGTCTG AAGTGGTTCA ATCAACGTCT CTGCGACGTG CTGGGGTATG AGCGCGATGC GCTCAAGGGA CGGATGATCA ATGATTTCGC CCACCCCGAA GATCGGCACA TTCGCCTGCA CAGTGCGCTG ATCGCAGCCA TCGATGGCGA AGCGTCGGTC GAAAAGCGCT ACGTCGCCAG GGATGGTCGA GAGATCCCTA TGCAGGTCAA AGGAACGCTG ATACGCGACG CGGCTGGCGA ACCGCATGAG ACTCTGGTGA TTTTTTTCGA TCTGACTGCA CAACGTGAAG CCGAGGCGCA ACGCCTGGCG GTGGAACGCG CTATGCAGGA AACGCAGCGT CTTGAGAGCA TGGGTACACT GGCAGGCGGG TTGGCGCACG ATTTCAATAA CCTGTTGTCC GGCATTTTGG GGAATACAAA CCTGGCGCTG CTCAATATTC CGGCAGACGC GCCAGCGCGC GCGTATCTGG AGCAGGTTGA AATTGCCGCC CAGCGCGCAG CCGAGATAAC GCGACAGATC CTGGCGTACA CCGGGCGCGG TCAGGTAGCG CGCGAGGTGA TCGATGTGCG TCATCTGCTC AACGATCTCA AGACACTGCT GGACACCGCT GCGCCTGCGA CTATTACAAT CAACTATCAG CTCGAACCAG GACCGCTCCC GGTCTGCTTC GACCGCACAC AATTGCGACA GGTTATTGTC GCGCTGATCC ACAATGCCGT CGATGCGATC AATGATGACG TGGGACAGAT CACGGTGACG ATAGGTGAGC GCCTGTTCGA TGCAGACCAT CTGCCGCGCG ACACTGTCGG CGCCGATCTG CGCGCCGGGC GCTACGCAGT CATCGAGGTG CGCGATACCG GTTGCGGAAT TGACGAGGAT GCGCGGGACC TTCTGTTTGT TCCGTTCTTC ACAACCAAAA AAGAGAGGCG TGGTCTGGGA CTCGCGGCAA CACTGGGGAT CGTGCGCAGT CACGGTGGCG CTATTCAGGT GGAAAGCGCT CCTGGACAGG GCAGCGTCTT TCGCGTGTTC ATTCCGACTG CACAGGAGTA TCCTGAGACG AAGACCGCTC CTGCGGTTAC GATTGTTCAG TCGCTCGACG ATCAGGCATC TCCGGTCCAA TCTGCGTCTG CGGGTTTCGC CCCTGCTCCC CCGGTCGATC AACGATCAGC CGCGCATGCA ATGCAGGACC TTGTGCTGAT CGTCGATGAT GAACCGACGG TGCGTTCGGT GGCGGCGCGC ATGGTCGAAC ATGTGGGTTT CACGACATTG CAGGCGTCTG ATGGTGTTGC GGGTGTTGAC CTGTTCCGCG CCAATGCCGA CTCGATAGTC TGTGTCTTGC TCGATGTCTC CATGCCAGGC ATAGGTGGAG CGCAGGCGCT TCAGATGATG CGCGCCATAC GCCCTGATGC GCCGATTGTG TTGATGAGCG GGTACGCGGG TGAAGAACTG GCGGAACGTT TTGCGCAACT GCGACCAGAT GGCTTTCTGT ACAAGCCATT CGATATCGCA GAACTTAAGG CATGCCTGGA GGGAGTGATC CGGAAAGGAG TGCGCGTGGG ATGA
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Protein sequence | MAQQITSRPG LFIAGYTALA LALGALVIAL RGYDFLLFIL IWPVILSAML VPWRMYLILI GIGVTVTAIT LPLVVPDLNR SATTAAAATT AAFLICESVY RVMRRQRAMA RALQESEERF RCTFERAPAP MAITDVHGRL KWFNQRLCDV LGYERDALKG RMINDFAHPE DRHIRLHSAL IAAIDGEASV EKRYVARDGR EIPMQVKGTL IRDAAGEPHE TLVIFFDLTA QREAEAQRLA VERAMQETQR LESMGTLAGG LAHDFNNLLS GILGNTNLAL LNIPADAPAR AYLEQVEIAA QRAAEITRQI LAYTGRGQVA REVIDVRHLL NDLKTLLDTA APATITINYQ LEPGPLPVCF DRTQLRQVIV ALIHNAVDAI NDDVGQITVT IGERLFDADH LPRDTVGADL RAGRYAVIEV RDTGCGIDED ARDLLFVPFF TTKKERRGLG LAATLGIVRS HGGAIQVESA PGQGSVFRVF IPTAQEYPET KTAPAVTIVQ SLDDQASPVQ SASAGFAPAP PVDQRSAAHA MQDLVLIVDD EPTVRSVAAR MVEHVGFTTL QASDGVAGVD LFRANADSIV CVLLDVSMPG IGGAQALQMM RAIRPDAPIV LMSGYAGEEL AERFAQLRPD GFLYKPFDIA ELKACLEGVI RKGVRVG
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