| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_3758 |
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| Symbol | |
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| ID | 3568423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 4040565 |
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| End bp | 4041995 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637682233 |
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| Product | helix-turn-helix, Fis-type:nitrogen regulation protein NR(I) |
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| Protein accession | YP_286957 |
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| Protein GI | 71909370 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 66 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.349567 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAGCC TACAAAATAT GAAACCGGTC TGGATCGTAG ACGACGATCG CTCCATCCGC
TGGGTGCTCG AGAAGACCCT GTCCCGCGAG GGCATCCCAT TCAAGAGCTA TGCCTCGGCC
AGCGAGGCGA TCTCCCAGCT CGAACAGGGC ATCGAGCCAC CACAGGTGCT GATGTCCGAC
ATCCGCATGC CAGGCCAGTC CGGGCTGGAA TTGCTGCAGG AGGTGAAGAC CCGCTTCCCG
TCGGTACCGG TCATCATCAT GACGGCCTAT TCCGATCTGG AAAGTGCGGT TGCTGCTTTC
CAGGGTGGGG CCTTCGAATA CCTGCCCAAA CCATTCGATG TCGACCAGGC GGTCGAACTG
ATTCGGCGTG CGATTGACGA ATCAATGCAC CAGAGTGGTG CAATGGAGGA GGAAGGGCTG
GTGCCGGAGA TTCTCGGCCA GGCACCTGCC ATGCAGGAAG TCTTCCGGGC CATCGGCCGA
CTTGCCCTCT CGCACGCCAC TGTGCTGATC ACCGGTGAAT CCGGTTCCGG CAAGGAGTTG
GTTGCCCGAG CCTTGCACCG GCACAGTCCG CGCGCCGATA AACCTTTCAT CGCAATCAAC
ACGGCTGCGA TCCCGAAGGA TTTATTGGAG TCCGAGCTGT TTGGTCACGA GCGTGGCGCC
TTTACCGGCG CCCAGGCTCA GCGGCGCGGT CGTTTCGAAC AGGCCGAGGC GGGCACCCTG
TTTCTCGATG AAATCGGCGA CATGCCCTCG GAGTTGCAGA CCCGCCTCTT GCGGGTGCTG
TCGGATGGCC ATTTTTACCG GGTCGGGGGC CATTCTCCGA TCAAGGCCAA CGTGCGCGTC
ATCGCAGCGA CACACCAGAA CCTCGAAACC CGTGTCAAGG ATGGCCTGTT CCGCGAGGAT
TTGTTCCATC GCCTGAACGT CATTCGCATT CGCCTGCCCG CCCTGCGTGA GCGGCACGAA
GATATTCCGC TGCTGGCCCG CCATTTTCTG CAGAAAAGTG CGCGCGAATT GGGCGTGGAA
ACCAAGCGTT TGACCGATGC GGCATTGAAG TATCTGTCAG GCCTGGAGTT TCAGGGCAAC
GTGCGGCAAC TGGAGAATCT CTGTCACTGG CTGACCGTGA TGGCGCCAGG GCAGCAAGTG
GATGTCGGCG ATTTGCCGGC CGAGTTGCGC GAGGCATCTT CAACGGTGTT GGCAACCGAT
TGGGAAAGTG CGCTGGAAGG CGAAGTCGAT CGCATGCTGG CGCGCGGCGT GCCGGATGTG
CATGGCGTTC TGGCCCAGAC CTTCGAACGC ATCCTGATTT CCCGGGCGTT GGCCCATACC
GGCGGGCGGC GGATCGAGGC AGCGCAAGCG CTGGGGATTG GTCGCAACAC GATCACCCGC
AAGATTGCCG AACTCGGTAT CGATGGCGGC AAGGAGCACG CAGCGGAGTA A
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| Protein sequence | MMSLQNMKPV WIVDDDRSIR WVLEKTLSRE GIPFKSYASA SEAISQLEQG IEPPQVLMSD
IRMPGQSGLE LLQEVKTRFP SVPVIIMTAY SDLESAVAAF QGGAFEYLPK PFDVDQAVEL
IRRAIDESMH QSGAMEEEGL VPEILGQAPA MQEVFRAIGR LALSHATVLI TGESGSGKEL
VARALHRHSP RADKPFIAIN TAAIPKDLLE SELFGHERGA FTGAQAQRRG RFEQAEAGTL
FLDEIGDMPS ELQTRLLRVL SDGHFYRVGG HSPIKANVRV IAATHQNLET RVKDGLFRED
LFHRLNVIRI RLPALRERHE DIPLLARHFL QKSARELGVE TKRLTDAALK YLSGLEFQGN
VRQLENLCHW LTVMAPGQQV DVGDLPAELR EASSTVLATD WESALEGEVD RMLARGVPDV
HGVLAQTFER ILISRALAHT GGRRIEAAQA LGIGRNTITR KIAELGIDGG KEHAAE
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