Gene Dfer_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1110 
Symbol 
ID8224681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1325775 
End bp1326821 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content52% 
IMG OID644928972 
Productadenylate/guanylate cyclase 
Protein accessionYP_003085524 
Protein GI255034903 
COG category[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0224811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.236606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCA AAATTCTCGT AGTGGACGAC GAGGCCGACC TGCAACTGCT CATTAAGCAG 
AAGTTCAGGC GGCAAATCCG CGAGCAGCAA TACGAATTTG TGTTTGCTGA GAACGGCCTG
CAAGCGCTGG AAGTGCTGGC GGAGCATCCC GATGTGGATA TGGTTTTGAG CGACATTAAT
ATGCCCGAAA TGGATGGGCT GACGCTCCTT GTGCGGCTCG GCGAAATGAG CCCGCTGCTG
AAATCCGTTA TCGTATCGGC ATATGGCGAT ATGGACAATA TCCGCACCGC CATGAACCGG
GGCGCCTTCG ATTTTCTGAC CAAACCCATT GATTTCCGCG ATTTGGAGGT CACGATGGAG
AAAACGCTCC AATACGTGGC GCAGCTGAAA GACACATTGA AGGCGGTGCG GGAAAACGAT
ATTCTGCGCA TGTATGTGGA TGCTTCGGTG CTGCAATTTA TGACGCAGGA AACGTTCGAA
AAGTCGCTGA TGACGAGCGA AACCATTGAA GGAACGGTCG TTTTTATGGA TATGTGCGGT
TTTACGGCCA TTTCGGAGAA GGAACAGCCG GACCGTGTGG TGAAGCTGAT CAACAAGTAT
TTCGATGTGA TGGTGAAGGA AATCATCGCG CAGGGCGGGC ACGTGGATAA GTTTATGGGC
GACGCCGTCA TGGCGGTTTT CCGCGGCGAA TACCACCTCG ACCGCGCGGT GGAATGTTCG
CTGGCCGTTC GCAACCATAT CAATGGATTT AAAGAAGAAC TTTCGGATAA TTCGGGCTAC
CATCCCAAGG TTTCGATCGG CATTAATTCC GGAGAAATGG TGTCGGGGAA TATTGGTTCG
GCGGCGCTGA AACGGCTGGA TTACACGGTG ATCGGCGATG TGGTGAATGT GGCGCAGCGA
CTGCAATCCA TTGCCAAACC GGGGCAGGTA GTGGTGCCGG ATTCTGCCTA CGAAAAGCTG
AAAGAGGCAT TTAAATGCAC CCAGGTAGGC GAAGTGAACC TCAAAAACAA ATCCAACCCG
GTGCTGATCT ACGAAGTGAT CGAATAG
 
Protein sequence
MKAKILVVDD EADLQLLIKQ KFRRQIREQQ YEFVFAENGL QALEVLAEHP DVDMVLSDIN 
MPEMDGLTLL VRLGEMSPLL KSVIVSAYGD MDNIRTAMNR GAFDFLTKPI DFRDLEVTME
KTLQYVAQLK DTLKAVREND ILRMYVDASV LQFMTQETFE KSLMTSETIE GTVVFMDMCG
FTAISEKEQP DRVVKLINKY FDVMVKEIIA QGGHVDKFMG DAVMAVFRGE YHLDRAVECS
LAVRNHINGF KEELSDNSGY HPKVSIGINS GEMVSGNIGS AALKRLDYTV IGDVVNVAQR
LQSIAKPGQV VVPDSAYEKL KEAFKCTQVG EVNLKNKSNP VLIYEVIE