| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0781 |
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| Symbol | |
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| ID | 4481070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 974370 |
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| End bp | 977675 |
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| Gene Length | 3306 bp |
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| Protein Length | 1101 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639721525 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_864708 |
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| Protein GI | 117924091 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.114215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAC TCTCACAGAG CGATGCACGT TTGATGTGTA CGGGCATCTA TTTCAGCCGC
CTCCTAGGCG GTGCTGCGTT GGTTATCCTG GTGCTGGGGG TTTGCCTACT GGTGTTGTTT
AATAGTTTTC AAAACCAGCG CGAAGCCACT CAAGCAGGCA TGCTCAAAAC AACCCGTTAT
CTACAACTGG GCATGACCCA CGCCTTTGAA TCGGTTGATA ATGCCCTTGA GCGGGTCAAG
GATGTTGTGC ATTCGCTCAA ATCACCCAAA CAGCTAAATG ATACCCTTAC CCAAGTTCTT
AAATTTTCCC CTCATCTCCG ACAAGTGATC ATAGCGGATA AAGAGGGGCA AGTCATCGCT
GACAGCGCTT TGGCGCTGTT TCCCACGCTA CCCCGCGTTA AACTTGATTT GCCAGCTTTG
GGGCTCAGCC AGGAACGCCT GCGCAGCTTG GGGGACCGCA TGTTGTTGGG CATTCCCCAA
CAAGGGCGCT TTCTCGGAGC TGCCCATGAT ATTGGTGCGC GGAACGATCT GTGGTTTATG
CCCATCGCCC TATTGGATGA GGGGCCACAG GGCCGCCACT CTATCGTTGC GGCCCTTAAC
CCACAGGCAC TCTTTGGCAG CTTTCAGTCT GCGGTGGAGG GTTCCCAGGG GAGCTCCGCT
TTGGTGCATC TGGATGGGCA CATTCTGTTT GCCGCAACCG CCAAACGGCA CCGTGGTGCG
GCGATGAAGG GAAAACAGCT CCATGCATCG TGGCAGGAGA CCTGGAGCCA AGGCGATGAA
GGGCTGGTGC CCCGCCTGCC GTTTGCGCGC CAACAATCAG GTTTTACCGC CTACCGAATC
TCACCCATCT ATCCCTTAGT TACCCTGGTT TCGGTCACGG ATGAGGACAT ATTGAGCGGG
TGGATCCATA AGAATACCGC ATTCATTGTC CTTATTAGCA TAACCCCTAT AGCAACCATG
CTACTGATTG GTTTGCTGTT GTGGCAAGAG CGCCGACGTT TGCGGTTAAA TGACCGCATT
CGGGTTTTGT CAGAGGTGGT CGAAAAAAGC CCGGCGGCGG TCATGATTAC CGATCCAAAA
GGTGCCATCA TCTATATCAA TAAAAGTTTT GAAACCCTGT TTGGCTACTC TGCTGAGCAG
GTGTTGGGCA ATACGCCGCG CATGCTAAAG AGTGGTTTAA CCGAAGATTT TGTCTATGCA
GAGCTGTGGC AAACCATAAC CGCAGGCGGT GTATGGAGTG GGGAGATGGT TAACCGTACC
GCCTGCGGAC AGTTATGCTG GACCTCTTGC ATTGTATCGG GGTTAATCAA CGATCAAGGG
GAGATGGGCT ACTATGTGGC GGTGGAGAGC GATACAACGG AAGCCAAGCA GAGAGAGTTG
GATCTACATA AGCTTTCCAC CGCAGTCGAG CAGAGCCCCA TCGCCATTGT CATCACCAAT
CAAGAGGGGG CGATTGAGTA TGTCAATCCA CATTTTTGCA ACATCTCGGG CTATAGCGCC
CAAGAGGTCT TGGGAGAAAA CCCCAGGCTG TTAAAATCGG GCGAGATGGC AGCGGCGTAT
TACCAGGAGT TATGGTCAAC CATTACCCGT GGTGAGGTGT GGCGTGGTGA ATTCCGCAAC
CGCCGTAAAA ATGGCAGCAC CTACTGGGAG TCGGCCACCA TCGCGCCGGT ACGGGATATT
AACGGCCAGA CCAGCCACTA TATTGCTTTA AAGGAAGATA TCTCCCTGCG CAAGAGCTAT
GAAGAACAAC TGATTGAAGA GAGACATAAA TATCAAGAGG CCAGCCGGGT AAAGTCTGAT
TTTCTGGCCA CCATAAGCCA TGAAATCCGC ACCCCAATGA ATACCATTTT GGGGATGACC
GGAGAGCTCA AAGAGAGCCA CTTGAGTGGT GAACAGCTCA AGCTGTTGCA ATCCATCCAG
GCCGCCGCGA GCAATCTGCT ACAGATTATC AATGATGTCT TAGATTTTTC CCGTTTTGAA
GCGGGTAGTA TTGAATTATT TATCGCCCCA CTGTTGTTGC GACAAGTCGT GAGTGAGGCC
GAGCAGATTG TCGCATTTCA AATTCGCAAA CAGGGCATTC GCTTTCTCAC CTACATGGAT
TCGACCGTTC CCCCCTTTAT CTTTGGTGAT GCGCAGCGAC TGCGACAGGT ATTGGTCAAC
TTGCTGGTCA ACGCCAGTAA ATTTACGGAA CAAGGGACGA TTGCGCTGTT GGTGCACCTT
CAACCGGGTA AAGCGGAGGC CAGCGATCAG CAGGAACTCT GTTTCCGGGT TGTGGATACG
GGGATTGGTA TTTCAGAAGC GCACCGCGAT AAGTTATTTC ACGCTTTTTC CCAGGCGGAT
GGGAGCATCA CCCGGCAATA TGGCGGCACG GGGTTAGGGC TTTCCATCAG CAAGCACTTG
GTTGGGATGA TGGGCGGAAC CATTGGCTTT GAGAGTTGCC AAGGGGTTGG CAGCACTTTT
TGGTTTACTT TGCCTTTGCA GGCGGATCAA ACAGAGGACG GCACACCCCA GTGGCGCCCT
ATTTTGAAAG AGATGCAGAT CTATAGCCTG CATGATCACC CGATCCATCT CAATTTTTAT
GAATCTTTTT TGGAGCAGTT GGGGGGGATT GTTACGCCGG ATCATTTTTC CGTGGACGAG
CATGTTGGGG TGGTTGATCG TCTCCGTGAG CACCCGCAAC TTTTGCTGTT TCATTTAGAA
AATATGGGGC AGATTCAGAT CCAGGGGATG GTCTCCGCCA TCCGCGCACG CTATTTTGAG
TTACCCATGG TGTTTTGTGC GGATTGTTCT GAGAATCTGC CTCTGCTCAA TGAGAGCATG
TGGGGCGTCT ATTTTGTCCA TGATCAGCAA GACCCCAGTC GCCTCTATCA AATTTTAGAA
CAGGCGGTAT CGGCACCACG GCCTATTCGA GAGCTGGCCC AGAGTGGTCC GCAAAAGCGG
ATTTTGGTGG TCGATGATTC GACGGACAAT TTGGAACTTA TCCGTCTGTT TTTAAAACGT
CAGCCCTATA CGCTTGAATT TGCCGAAAGT GGTCAGGAAG CCGTGGACAA GGTCAGGCAA
CGCCCCTCTT TTGACTTGAT CTTGATGGAT GTGCAGATGC CAGGTATGGA TGGTTATCAG
GCGACTCGGA CGATTCGCCT TTGGGAAAAG GCGAACGATT TGGCGAGCAT CCCTATTATC
GCTTTAACGG CCCATGCCAT GCCGGAGCAT CGGGAGAACT CGTTAAGGGC GGGGTGTCAG
GAGCATTTGA CCAAACCTAT TCATAAATTG GTGCTTATCC AGGAGTTACA GCGTTTTTTA
GCGTAA
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| Protein sequence | MIPLSQSDAR LMCTGIYFSR LLGGAALVIL VLGVCLLVLF NSFQNQREAT QAGMLKTTRY
LQLGMTHAFE SVDNALERVK DVVHSLKSPK QLNDTLTQVL KFSPHLRQVI IADKEGQVIA
DSALALFPTL PRVKLDLPAL GLSQERLRSL GDRMLLGIPQ QGRFLGAAHD IGARNDLWFM
PIALLDEGPQ GRHSIVAALN PQALFGSFQS AVEGSQGSSA LVHLDGHILF AATAKRHRGA
AMKGKQLHAS WQETWSQGDE GLVPRLPFAR QQSGFTAYRI SPIYPLVTLV SVTDEDILSG
WIHKNTAFIV LISITPIATM LLIGLLLWQE RRRLRLNDRI RVLSEVVEKS PAAVMITDPK
GAIIYINKSF ETLFGYSAEQ VLGNTPRMLK SGLTEDFVYA ELWQTITAGG VWSGEMVNRT
ACGQLCWTSC IVSGLINDQG EMGYYVAVES DTTEAKQREL DLHKLSTAVE QSPIAIVITN
QEGAIEYVNP HFCNISGYSA QEVLGENPRL LKSGEMAAAY YQELWSTITR GEVWRGEFRN
RRKNGSTYWE SATIAPVRDI NGQTSHYIAL KEDISLRKSY EEQLIEERHK YQEASRVKSD
FLATISHEIR TPMNTILGMT GELKESHLSG EQLKLLQSIQ AAASNLLQII NDVLDFSRFE
AGSIELFIAP LLLRQVVSEA EQIVAFQIRK QGIRFLTYMD STVPPFIFGD AQRLRQVLVN
LLVNASKFTE QGTIALLVHL QPGKAEASDQ QELCFRVVDT GIGISEAHRD KLFHAFSQAD
GSITRQYGGT GLGLSISKHL VGMMGGTIGF ESCQGVGSTF WFTLPLQADQ TEDGTPQWRP
ILKEMQIYSL HDHPIHLNFY ESFLEQLGGI VTPDHFSVDE HVGVVDRLRE HPQLLLFHLE
NMGQIQIQGM VSAIRARYFE LPMVFCADCS ENLPLLNESM WGVYFVHDQQ DPSRLYQILE
QAVSAPRPIR ELAQSGPQKR ILVVDDSTDN LELIRLFLKR QPYTLEFAES GQEAVDKVRQ
RPSFDLILMD VQMPGMDGYQ ATRTIRLWEK ANDLASIPII ALTAHAMPEH RENSLRAGCQ
EHLTKPIHKL VLIQELQRFL A
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