| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_2521 |
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| Symbol | |
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| ID | 5870310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 2832857 |
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| End bp | 2834284 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641547644 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001668756 |
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| Protein GI | 167033525 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0633509 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCACA GCATCCTGGT AGTCGAGGAT GATGAAATCC TCGCCGACAA CATTCGCACC
TACCTCAGCC TCAAGGGCTA CGAGGTTACC GTTTGCCACA GCGCGGAGCT GGCGCTGGAG
CAGATCAAGC GGGCCCAGCC CGATGCGGTG CTGACCGACA ACTCGCTGCC GGGCATGAGC
GGGCATGACC TGCTGCGTAC CCTGGTGGCA CAGGTGGCGG ACTTGAAAGT GATCATGATG
ACCGGCTACG GCAATGTCGA AGATGCCGTG CAGGCGATGA AGGAGGGCGC GTTCCATTAC
CTGACCAAGC CTGTGGTACT GGCCGAGCTC AAGCTGACCC TGGACAAGGC CCTGGCCGCC
GAGCGCATGG AGCGCACGCT GTCGTTCTAC CAGGAACGCG AGGCGCAGAA GTCCGGGCTG
CAGGCGCTGA TTGGCGAGTC GCCGGTGATG CTCACGCTCA AGCACACCCT GCGCCAGGTG
CTCGATGCCG AACGGCGCAT GGCCAGCGAC GACCTGCCAC CAGTGCTGGT CGAAGGCGAG
ACCGGCACCG GCAAGGAGCT GGTGGCCCGT GCCCTGCATT TTGACGGCTC GCGCAGCAAA
GGGCCGTTCA TCGAGTTCAA TTGCGCCTCG ATCCCTGCCA ACCTGCTGGA GGCTGAACTG
TTCGGCCACG AGAAGGGCGC GTTCACCGAT GCCAAGGAGC GCCGGGTGGG CCTGGTAGAG
GCTGCCGATG GCGGCACCTT GTTCCTTGAC GAGATCGGCG AGATGGACCT GGTGCTGCAG
GCCAAGCTAC TCAAGTTGCT GGAAGATCGA AGCATCCGAC GGATTGGTGC AGTGAAGGAG
CGCAAGGTCG ACCTGCGGGT GATCAGCGCT ACCAACTGTA ACCTGGAGCA AATGGTGCAG
CAGGGCAAGT TTCGCCGCGA CCTGTTCTTC CGTCTGCGTA TCATCGCCCT GAAGGTGCCG
CGCCTGTATG CCCGTGGGCA GGACATTCTG TTACTGGCAA GGCATTTTCT GGCCCACCAT
GGCCGGCGGT ATGGCAAGCC GAACCTGCGT TTTTCTGCCG AAGCAGAAAG CTTGATGCTT
GGTTACAGCT GGCCCGGTAA TGTGCGCGAA TTGCGCAACA TGCTGGAGCA GACCGTGTTG
CTGGCGCCGA ACGAGGTGGT GCAGGCGCAT CAGCTGAACC TGTGCATGAC GTTGATTGAC
GAGCCATTGG TGCAGCAGCC AGCGCCGGTG ATGTTCGAAA TGCCGCGACA CGAGCCGGAG
CCCGGTACCA GCCTGCCGGA CATGGAACGT GACCTGGTGT GCAAGACCCT GGACCGCACT
GACTGGAATG TGACCAAGTC AGCACGAATG CTTGGGCTGT CGCGGGACAT GCTGCGTTAC
AGGATCGAGA AACTGGGATT GACCCGGCCT GACAAGCGTC AGTGGTAA
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| Protein sequence | MEHSILVVED DEILADNIRT YLSLKGYEVT VCHSAELALE QIKRAQPDAV LTDNSLPGMS
GHDLLRTLVA QVADLKVIMM TGYGNVEDAV QAMKEGAFHY LTKPVVLAEL KLTLDKALAA
ERMERTLSFY QEREAQKSGL QALIGESPVM LTLKHTLRQV LDAERRMASD DLPPVLVEGE
TGTGKELVAR ALHFDGSRSK GPFIEFNCAS IPANLLEAEL FGHEKGAFTD AKERRVGLVE
AADGGTLFLD EIGEMDLVLQ AKLLKLLEDR SIRRIGAVKE RKVDLRVISA TNCNLEQMVQ
QGKFRRDLFF RLRIIALKVP RLYARGQDIL LLARHFLAHH GRRYGKPNLR FSAEAESLML
GYSWPGNVRE LRNMLEQTVL LAPNEVVQAH QLNLCMTLID EPLVQQPAPV MFEMPRHEPE
PGTSLPDMER DLVCKTLDRT DWNVTKSARM LGLSRDMLRY RIEKLGLTRP DKRQW
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