More than 300 homologs were found in PanDaTox collection
for query gene Mext_1821 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010172  Mext_1821  response regulator receiver  100 
 
 		 235 aa  459  9.999999999999999e-129  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010725  Mpop_1772  two component transcriptional regulator, winged helix family  99.57 
 
 		 235 aa  458  9.999999999999999e-129  Methylobacterium populi BJ001  Bacteria  normal  0.904735  normal  1 
 
 
-
 
NC_011757  Mchl_2156  two component transcriptional regulator, winged helix family  99.57 
 
 		 235 aa  459  9.999999999999999e-129  Methylobacterium chloromethanicum CM4  Bacteria  decreased coverage  0.00956512  normal  0.0958311 
 
 
-
 
NC_010505  Mrad2831_0520  two component transcriptional regulator  76.82 
 
 		 234 aa  367  1e-101  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.224382  normal  1 
 
 
-
 
NC_011894  Mnod_5993  two component transcriptional regulator, winged helix family  75.11 
 
 		 234 aa  354  5e-97  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0299234  n/a   
 
 
-
 
NC_010511  M446_5762  two component transcriptional regulator  74.25 
 
 		 234 aa  350  1e-95  Methylobacterium sp. 4-46  Bacteria  normal  0.120401  normal  0.403713 
 
 
-
 
NC_009720  Xaut_1803  two component transcriptional regulator  67.86 
 
 		 232 aa  286  1e-76  Xanthobacter autotrophicus Py2  Bacteria  normal  0.782093  normal  0.890279 
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  44.84 
 
 		 224 aa  165  5.9999999999999996e-40  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal  1 
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  44.05 
 
 		 224 aa  164  8e-40  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1435  two component transcriptional regulator, winged helix family  42.04 
 
 		 233 aa  161  7e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013501  Rmar_0513  two component transcriptional regulator, winged helix family  42.22 
 
 		 228 aa  159  4e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  0.985837  n/a   
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  44.44 
 
 		 252 aa  157  1e-37  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_009253  Dred_0759  two component transcriptional regulator  40.87 
 
 		 223 aa  156  2e-37  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00128917  n/a   
 
 
-
 
NC_005945  BAS2999  DNA-binding response regulator  39.46 
 
 		 224 aa  155  4e-37  Bacillus anthracis str. Sterne  Bacteria  normal  0.227145  n/a   
 
 
-
 
NC_007530  GBAA_3229  DNA-binding response regulator  39.46 
 
 		 224 aa  155  4e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3423  response regulator receiver protein  46.19 
 
 		 224 aa  155  5.0000000000000005e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  0.699539  normal  0.107362 
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  42.04 
 
 		 236 aa  154  1e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  39.46 
 
 		 224 aa  154  1e-36  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008148  Rxyl_3017  two component transcriptional regulator  44.64 
 
 		 225 aa  154  2e-36  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_2277  two component transcriptional regulator  43.56 
 
 		 248 aa  153  2.9999999999999998e-36  Salinispora arenicola CNS-205  Bacteria  normal  0.113906  normal  0.0109188 
 
 
-
 
NC_010001  Cphy_0015  two component transcriptional regulator  38.5 
 
 		 228 aa  151  8e-36  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1351  two component transcriptional regulator, winged helix family  42.22 
 
 		 225 aa  151  8.999999999999999e-36  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00188361  unclonable  0.0000000206018 
 
 
-
 
NC_010003  Pmob_0851  two component transcriptional regulator  39.01 
 
 		 222 aa  150  1e-35  Petrotoga mobilis SJ95  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3036  two component transcriptional regulator, winged helix family  43.11 
 
 		 273 aa  150  1e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.106658  normal  1 
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  39.46 
 
 		 224 aa  151  1e-35  Bacillus cereus G9842  Bacteria  normal  0.725953  normal  1 
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  39.01 
 
 		 224 aa  150  2e-35  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_0717  two component transcriptional regulator, winged helix family  38.86 
 
 		 242 aa  149  4e-35  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.00000387016 
 
 
-
 
NC_010184  BcerKBAB4_2944  two component transcriptional regulator  39.46 
 
 		 224 aa  149  5e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0958095  n/a   
 
 
-
 
NC_013411  GYMC61_0523  two component transcriptional regulator, winged helix family  39.38 
 
 		 224 aa  148  8e-35  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009997  Sbal195_0632  two component transcriptional regulator  37.89 
 
 		 227 aa  148  9e-35  Shewanella baltica OS195  Bacteria  normal  0.157641  normal  1 
 
 
-
 
NC_009665  Shew185_0604  two component transcriptional regulator  37.89 
 
 		 227 aa  148  9e-35  Shewanella baltica OS185  Bacteria  decreased coverage  0.00704602  n/a   
 
 
-
 
NC_008699  Noca_1613  response regulator receiver  43.05 
 
 		 225 aa  147  1.0000000000000001e-34  Nocardioides sp. JS614  Bacteria  normal  0.97266  n/a   
 
 
-
 
NC_013411  GYMC61_1213  two component transcriptional regulator, winged helix family  39.56 
 
 		 223 aa  147  2.0000000000000003e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_0717  two component transcriptional regulator, winged helix family  39.82 
 
 		 226 aa  147  2.0000000000000003e-34  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.000154116  n/a   
 
 
-
 
NC_013172  Bfae_07910  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  38.05 
 
 		 239 aa  146  3e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  38.5 
 
 		 228 aa  145  4.0000000000000006e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_009952  Dshi_0449  two component transcriptional regulator  42.92 
 
 		 227 aa  145  4.0000000000000006e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.376072  normal  1 
 
 
-
 
NC_009953  Sare_4064  two component transcriptional regulator  38.57 
 
 		 233 aa  146  4.0000000000000006e-34  Salinispora arenicola CNS-205  Bacteria  normal  0.98903  normal  0.0666639 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  40.44 
 
 		 236 aa  145  4.0000000000000006e-34  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_009380  Strop_3686  response regulator receiver  39.46 
 
 		 233 aa  145  5e-34  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  38.12 
 
 		 237 aa  145  5e-34  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  39.01 
 
 		 240 aa  145  5e-34  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal  1 
 
 
-
 
NC_011884  Cyan7425_3411  two component transcriptional regulator, winged helix family  38.94 
 
 		 224 aa  145  6e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.591115  normal  1 
 
 
-
 
NC_013947  Snas_2104  two component transcriptional regulator, winged helix family  39.91 
 
 		 225 aa  144  9e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.302064  normal  0.805943 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  43.17 
 
 		 406 aa  144  1e-33  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4793  two component transcriptional regulator, winged helix family  41.07 
 
 		 219 aa  144  1e-33  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.732153 
 
 
-
 
NC_008752  Aave_3002  two component transcriptional regulator  40.79 
 
 		 230 aa  144  1e-33  Acidovorax citrulli AAC00-1  Bacteria  normal  0.67465  normal  0.369251 
 
 
-
 
NC_011126  HY04AAS1_1151  two component transcriptional regulator, winged helix family  36.12 
 
 		 225 aa  144  1e-33  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1330  response regulator receiver  41.26 
 
 		 219 aa  143  2e-33  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_0165  two component transcriptional regulator  42.6 
 
 		 243 aa  143  2e-33  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1449  two component transcriptional regulator  38.5 
 
 		 246 aa  143  2e-33  Acidothermus cellulolyticus 11B  Bacteria  normal  0.566781  normal  1 
 
 
-
 
NC_013739  Cwoe_0293  two component transcriptional regulator, winged helix family  42.6 
 
 		 226 aa  143  2e-33  Conexibacter woesei DSM 14684  Bacteria  normal  0.591061  normal  0.658536 
 
 
-
 
NC_008705  Mkms_0174  two component transcriptional regulator  42.6 
 
 		 243 aa  143  2e-33  Mycobacterium sp. KMS  Bacteria  normal  0.947413  normal  1 
 
 
-
 
NC_008726  Mvan_2296  two component transcriptional regulator  41.78 
 
 		 255 aa  143  2e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.398969  normal  0.240289 
 
 
-
 
NC_009077  Mjls_0155  two component transcriptional regulator  42.6 
 
 		 243 aa  143  2e-33  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0636837 
 
 
-
 
NC_013525  Tter_1098  two component transcriptional regulator, winged helix family  39.56 
 
 		 228 aa  142  3e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008726  Mvan_0191  two component transcriptional regulator  42.6 
 
 		 244 aa  143  3e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_0461  two component transcriptional regulator  42.6 
 
 		 248 aa  142  4e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.735267  normal  0.697364 
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  43.36 
 
 		 228 aa  142  4e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_010571  Oter_1727  two component transcriptional regulator  40.71 
 
 		 228 aa  142  4e-33  Opitutus terrae PB90-1  Bacteria  normal  0.284746  normal  1 
 
 
-
 
NC_009565  TBFG_11051  two component system transcriptional regulator trcR  40.44 
 
 		 257 aa  142  6e-33  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008025  Dgeo_2149  two component transcriptional regulator  39.91 
 
 		 221 aa  141  7e-33  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_3615  two component heavy metal response transcriptional regulator, winged helix family  40.18 
 
 		 224 aa  141  7e-33  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_31480  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37 
 
 		 239 aa  141  8e-33  Sanguibacter keddieii DSM 10542  Bacteria  hitchhiker  0.00376265  normal  0.556858 
 
 
-
 
NC_007794  Saro_1631  two component transcriptional regulator  39.74 
 
 		 227 aa  141  9e-33  Novosphingobium aromaticivorans DSM 12444  Bacteria  hitchhiker  0.0039171  n/a   
 
 
-
 
NC_007333  Tfu_0257  response regulator receiver  36.05 
 
 		 241 aa  141  9.999999999999999e-33  Thermobifida fusca YX  Bacteria  normal  0.926332  n/a   
 
 
-
 
NC_009338  Mflv_1887  two component transcriptional regulator  41.74 
 
 		 231 aa  141  9.999999999999999e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.882564  normal  0.344123 
 
 
-
 
NC_011725  BCB4264_A2673  DNA-binding response regulator  36.61 
 
 		 224 aa  140  9.999999999999999e-33  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_007952  Bxe_B1389  two component heavy metal response transcriptional regulator  40.71 
 
 		 225 aa  140  9.999999999999999e-33  Burkholderia xenovorans LB400  Bacteria  normal  0.717226  normal  0.091392 
 
 
-
 
NC_013216  Dtox_4346  two component transcriptional regulator, winged helix family  39.46 
 
 		 384 aa  140  9.999999999999999e-33  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.0299016  normal  1 
 
 
-
 
NC_011831  Cagg_3265  two component transcriptional regulator, winged helix family  39.01 
 
 		 245 aa  140  9.999999999999999e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.45002  normal  1 
 
 
-
 
NC_010623  Bphy_3962  two component heavy metal response transcriptional regulator  40.27 
 
 		 225 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012918  GM21_3720  two component heavy metal response transcriptional regulator, winged helix family  40.18 
 
 		 224 aa  140  1.9999999999999998e-32  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  37.67 
 
 		 239 aa  140  1.9999999999999998e-32  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_010803  Clim_1291  two component transcriptional regulator, winged helix family  38.39 
 
 		 222 aa  140  1.9999999999999998e-32  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1806  two component transcriptional regulator, winged helix family  41.07 
 
 		 225 aa  140  1.9999999999999998e-32  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0205791  normal  0.258829 
 
 
-
 
NC_003909  BCE_2675  DNA-binding response regulator  36.89 
 
 		 224 aa  139  3e-32  Bacillus cereus ATCC 10987  Bacteria  normal  0.0180828  n/a   
 
 
-
 
NC_009921  Franean1_6507  two component transcriptional regulator  38.33 
 
 		 270 aa  139  3e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0763131  normal  0.20607 
 
 
-
 
NC_010676  Bphyt_5224  two component heavy metal response transcriptional regulator, winged helix family  40.71 
 
 		 225 aa  139  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  0.57611  normal  1 
 
 
-
 
NC_013521  Sked_01690  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  43.3 
 
 		 217 aa  139  3.9999999999999997e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.459553  normal  0.405302 
 
 
-
 
NC_007517  Gmet_1026  two component transcriptional regulator  40.62 
 
 		 224 aa  139  4.999999999999999e-32  Geobacter metallireducens GS-15  Bacteria  normal  1  hitchhiker  0.000442073 
 
 
-
 
NC_013530  Xcel_2937  two component transcriptional regulator, winged helix family  35.22 
 
 		 243 aa  138  6e-32  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_2356  DNA-binding response regulator  35.78 
 
 		 232 aa  138  6e-32  Clostridium perfringens ATCC 13124  Bacteria  normal  0.020915  n/a   
 
 
-
 
NC_014151  Cfla_1294  two component transcriptional regulator, winged helix family  42.99 
 
 		 218 aa  138  7e-32  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0476117  hitchhiker  0.00354598 
 
 
-
 
NC_010184  BcerKBAB4_2492  two component transcriptional regulator  35.71 
 
 		 224 aa  138  7e-32  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.22217  n/a   
 
 
-
 
NC_012803  Mlut_04130  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  37.89 
 
 		 236 aa  138  7e-32  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118973  n/a   
 
 
-
 
NC_007964  Nham_3296  two component transcriptional regulator  40.18 
 
 		 224 aa  138  7.999999999999999e-32  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  38.5 
 
 		 234 aa  138  7.999999999999999e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_007777  Francci3_0234  two component transcriptional regulator  38.22 
 
 		 242 aa  138  8.999999999999999e-32  Frankia sp. CcI3  Bacteria  normal  1  normal  0.925989 
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40 
 
 		 271 aa  138  8.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_008146  Mmcs_4301  two component transcriptional regulator  41.13 
 
 		 230 aa  138  8.999999999999999e-32  Mycobacterium sp. MCS  Bacteria  normal  0.681825  n/a   
 
 
-
 
NC_008705  Mkms_4387  two component transcriptional regulator  41.13 
 
 		 230 aa  138  8.999999999999999e-32  Mycobacterium sp. KMS  Bacteria  normal  0.0316317  normal  1 
 
 
-
 
NC_009077  Mjls_4681  two component transcriptional regulator  41.13 
 
 		 230 aa  138  8.999999999999999e-32  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.354926 
 
 
-
 
NC_013093  Amir_0379  two component transcriptional regulator, winged helix family  40.36 
 
 		 233 aa  137  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.605912  n/a   
 
 
-
 
NC_008392  Bamb_5988  two component heavy metal response transcriptional regulator  41.07 
 
 		 225 aa  137  1e-31  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008537  Arth_4535  two component transcriptional regulator  41.33 
 
 		 227 aa  137  1e-31  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  36.73 
 
 		 224 aa  137  1e-31  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_008726  Mvan_4844  two component transcriptional regulator  40.87 
 
 		 231 aa  137  1e-31  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.312171 
 
 
-
 
NC_013174  Jden_2051  two component transcriptional regulator, winged helix family  35.81 
 
 		 236 aa  137  1e-31  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0753  two component transcriptional regulator, winged helix family  40.09 
 
 		 241 aa  137  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.407347  n/a   
 
 
-
 
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