Gene Mnod_5993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5993 
Symbol 
ID7305353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand
Start bp6096535 
End bp6097239 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content71% 
IMG OID643603616 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002501123 
Protein GI220925821 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0299234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAGCG TGCTGGTCGT CGAGGACGAC AGCGACATCC GCGGCATGCT CGCCCGCGGC 
CTGAGTGCCG AAGGATTCTC CGTCAACCTC GCGGGAAGCG TCGACGAGGC GCTCGCCGCC
GCCCGCGACC GGGTGCCGGA GGCGGTGCTT CTCGACATCA TGCTGCCGGA CGGCTCCGGC
CACGACGTCT GCCGCTCGCT GCGCGAGGGG GGCTATCCGG GAGCCATCCT GTTCCTCAGC
GCCAAGGACG AGGTCAGCGA CCGGGTCGAT GGCCTCGCGG TCGGCGCGGA CGACTACATT
GTCAAGCCCT TCGCCTTCGA CGAGCTGCTG GCGCGGCTGC GCACCCACCT GCAGCGGCGG
CGCGCGGCGG GCGAGCCCCG CACCCTGGTG ACCGCCGGCC GCCTCTCCCT CGACTTCGAG
ACCCGGCAGG TGCGCTTCGG CGACACCACC GCCCGCCTCA CCCAGCGGGA GGCGGAGCTG
CTCTCCGTGC TGATGGAGCA CGCCAACCGG CCGGTGACGC GGGGCGACAT CTTCGACCGG
CTCTGGGCCA ACCAGGGCGG CCTCTCGCTC AACGTCGTCG ACGTCTATGT GGGCTACCTG
CGCACCAAGC TCGGGGACAT CGCCAGACAG GGCGGTCCCA CCATCGTGAC GGTGCGCGGA
CGCGGCTTCA TGCTCGACCT GCGTGAACCG AACTTCCGCC AGTAA
 
Protein sequence
MTSVLVVEDD SDIRGMLARG LSAEGFSVNL AGSVDEALAA ARDRVPEAVL LDIMLPDGSG 
HDVCRSLREG GYPGAILFLS AKDEVSDRVD GLAVGADDYI VKPFAFDELL ARLRTHLQRR
RAAGEPRTLV TAGRLSLDFE TRQVRFGDTT ARLTQREAEL LSVLMEHANR PVTRGDIFDR
LWANQGGLSL NVVDVYVGYL RTKLGDIARQ GGPTIVTVRG RGFMLDLREP NFRQ