Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0604 |
Symbol | |
ID | 5370480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 722296 |
End bp | 722979 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640828802 |
Product | two component transcriptional regulator |
Protein accession | YP_001364828 |
Protein GI | 152999147 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00704602 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTAT TGCTTGTCGA AGATGAACAA AAAATTGCAG ATTTTATCTG TGAAGGTTTG CGTGCCAAAC ATTTCAACGT CACTCATTGT GCCGATGGCA ATCAAGGTTA TCAGGCGGCA AGTAATAATA CTCATGATGT GATTATTCTC GACATTATGC TACCGGGCAG AGATGGTTTG GATATTCTTC GTTCGCTGCG TCAACAAGGT GTCGATACGC CCATTATTCT GCTTACGGCA CGTAATGAAT TGGGTGATCG CGTTCAAGGG TTAGACATGG GCGCTGATGA TTACTTAGCA AAACCGTTTT ATGTTGAAGA GTTGCATGCT CGGATTCAAG CCTTGCTTCG ACGGCATGGC GGCACACAAC AGCATGTCGT TGAGGTAGGC GCGTTGCAAC TTGATTGTAT TAATCGAAGC ATTAATTGTC AGGGTCAATC AGTCGAACTC ACTAGCCGAG AATTTAGCTT GCTTGAACAC TTAATGCGTT CACCTAACCA AGTATTAACC CGGGGGCAGT TGTTGGAGCA TGTTTGGGGA TACGACTTTG ATCCTTGTAC CAATGTTGTT GATGTGTGCA TTAAACGCAT CCGCAGTAAA ATGGCTTCAT TAGAGAAGGC CGGAAAAATG GTCGGCGCCA TTGAGTCGAT CCGCGGCACA GGTTATCGCC TGAGCATTCG ATAA
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Protein sequence | MNVLLVEDEQ KIADFICEGL RAKHFNVTHC ADGNQGYQAA SNNTHDVIIL DIMLPGRDGL DILRSLRQQG VDTPIILLTA RNELGDRVQG LDMGADDYLA KPFYVEELHA RIQALLRRHG GTQQHVVEVG ALQLDCINRS INCQGQSVEL TSREFSLLEH LMRSPNQVLT RGQLLEHVWG YDFDPCTNVV DVCIKRIRSK MASLEKAGKM VGAIESIRGT GYRLSIR
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