| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_1026 |
|---|
| Symbol | |
|---|
| ID | 3738131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 1141939 |
|---|
| End bp | 1142613 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637778304 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_383992 |
|---|
| Protein GI | 78222245 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.000442073 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCC TCATTATCGA AGACGAAAAG AGAATGGCCG GGATTCTGAA AAAGGGGCTC
GAGGAAAACG CCTTCATCGT CGACCTGGCC GGCGACGGTG AAGAAGGGTT GTACATGGCC
GAGAACTATC CCTACGACGC GGTACTGCTC GACATCATGC TCCCGGTCAT GGACGGCCTC
TCGATCCTGA GCGCGTTGCG GTCGAAGAGA AGCGAGGTAC CGGTCCTCCT GATCACCGCC
CGGGGGGAGA TCGAGAGCAG AATAAAGGGG CTCAATTTCG GAGCGGATGA CTATATCGTG
AAGCCCTTTG ACTTTCATGA ACTCCTGGCG CGGCTGAAAT CGGTGATCCG GAGGAGCAAG
GGGAGACCTT CACCCCTTGT TGCAATCGAC GACCTATCAC TGGACACGAA CTCCCGGAGC
GTATGCCGCG GCGGGAGAGA GATCCGCCTG TCCGCTACCG AATACAATCT CCTTGAATAC
CTGGCGCTGA ACAGCGGCAG GGTAATCAGC AGGACTGAAC TTACGGAGCA TATCTACGAC
ACGGACTTCG ACCGCGACAG CAACGTCATC GACGTCTATG TGAACCACCT GCGAAACAAG
CTGGATAAGG GCTTTGACCG ACAGCTCATC CACACGGTGC GGGGCGCGGG CTACATCCTG
AAAGGCGATG CATGA
|
|---|
| Protein sequence | MKILIIEDEK RMAGILKKGL EENAFIVDLA GDGEEGLYMA ENYPYDAVLL DIMLPVMDGL
SILSALRSKR SEVPVLLITA RGEIESRIKG LNFGADDYIV KPFDFHELLA RLKSVIRRSK
GRPSPLVAID DLSLDTNSRS VCRGGREIRL SATEYNLLEY LALNSGRVIS RTELTEHIYD
TDFDRDSNVI DVYVNHLRNK LDKGFDRQLI HTVRGAGYIL KGDA
|
|---|
| |