Gene Tfu_1330 details

Gene Information

• Locus tag: Tfu_1330
• ID: 3579302
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobifida fusca YX
• Kingdom: Bacteria
• Replicon accession: NC_007333
• Strand: +
• Start bp: 1541032
• End bp: 1541691
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637685027
• Product: response regulator receiver
• Protein accession: YP_289391
• Protein GI: 72161734
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGCA TCCTGATCGT CGAAGATGAA GACCGCATCG CCTCGTTCGT CCGCAAAGGG 
TTGAACGCGA ACGGGTTCAC CAGCACCGTG GTGGACCGCG CGGGCGCCGC CATCGACTAT 
GCGCTCACCG GCAATTTCGA CCTCATGGTT CTTGACCTGG GCCTGCCGGA CGCTGACGGG 
TTCACGGTGC TGCGCCGGCT GCGTGAGGAA GGCAGCCGGC TGCCGATCAT CATCCTCACT 
GCTCGCGACA GTGTGCGGGA CACGGTGACC GGTCTGGAAA CCGGTGCCGA CGACTACATG 
ACTAAACCGT TCCGCTTCGA AGAACTCCTT GCCCGTATCC GGTTGCGTAT GCGGAGCGCG 
CACAACGCGG AAACAACCGT GCTCCACGCC GGTGACCTCG CCCTTGATCT GCGCACCCGC 
CGCGCCTCCA CCCCTGAGGC CACTGTCGAC TTGACGGCCC GCGAGTTCGC CCTGTTGGAA 
CTGTTCCTCC GCCACCCAGG CCAGGTGCTG TCCCGCCAGC AGATTCTCTC CCACGTGTGG 
GGCTACGACT ACGACCCCGG CTCCAACGTG GTCGACGTGT TCATCCGCGC GTTGCGGAAG 
AAGATCGGCG CCCACCGGAT CGAAACCCTC CGCGGCATGG GATACCGGCT TGGCGGTTGA 

 

Protein sequence

MARILIVEDE DRIASFVRKG LNANGFTSTV VDRAGAAIDY ALTGNFDLMV LDLGLPDADG 
FTVLRRLREE GSRLPIIILT ARDSVRDTVT GLETGADDYM TKPFRFEELL ARIRLRMRSA 
HNAETTVLHA GDLALDLRTR RASTPEATVD LTAREFALLE LFLRHPGQVL SRQQILSHVW 
GYDYDPGSNV VDVFIRALRK KIGAHRIETL RGMGYRLGG