| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5224 |
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| Symbol | |
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| ID | 6280541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1398806 |
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| End bp | 1399483 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642616310 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_001888953 |
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| Protein GI | 187919922 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.57611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATCC TGGTGATCGA GGACGAGCTG AAAACAGCGG CCTACCTCAA GAAGGGCCTG
GAAGAATCCG GCTATGCGGT CGATGTGGCC AACGACGGCC CGCAAGGGCT GATCCTCGCG
CTGGAAGAAG AGTACGACGT GATCGTGCTC GACGTGATGC TGCCGGGCAT CGACGGCTGG
ACCGTCGTCA AGACCTTGCG CGCGAAACGC ACCACGCCCG TGCTGTTCCT GACCGCGCGC
GACGACGTCG ACGACCGCGT GCGCGGCCTC GAACTCGGCG CGGACGATTA CCTCGTCAAA
CCCTTTGCCT TCGTCGAATT GCTGGCGCGC GTGCGCACGC TGGCGCGCCG CGGTCCGCCG
CGCGAAAGCG AACTGATCAA GGTGGGCGAT CTGGAAATGG ACGTGAACCG CCGTCGCGTG
AAGCGTGGCG GCACGCGTAT CGACCTCACG CCACGCGAAT TCTCGCTGCT GCAACTGCTC
GCGCGCCGTC AGGGCGAAGT GCTGAGCCGT ACGCAAATCG CGTCGTATGT GTGGGACATG
AATTTCGACA GCGACACCAA TGTGGTCGAA GTGGCGATCC GCCGCTTGCG CACCAAGATC
GACGACGACT TTCCCGTCAA GCTGATTCAC ACCGTGCGCG GCGTGGGTTA CGTGCTCGAA
CTGAAGGACA CCGCTTGA
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| Protein sequence | MRILVIEDEL KTAAYLKKGL EESGYAVDVA NDGPQGLILA LEEEYDVIVL DVMLPGIDGW
TVVKTLRAKR TTPVLFLTAR DDVDDRVRGL ELGADDYLVK PFAFVELLAR VRTLARRGPP
RESELIKVGD LEMDVNRRRV KRGGTRIDLT PREFSLLQLL ARRQGEVLSR TQIASYVWDM
NFDSDTNVVE VAIRRLRTKI DDDFPVKLIH TVRGVGYVLE LKDTA
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