| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_0449 |
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| Symbol | |
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| ID | 5711365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009952 |
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| Strand | + |
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| Start bp | 437751 |
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| End bp | 438434 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641266353 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001531798 |
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| Protein GI | 159043004 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.376072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGC GCCTTCTGAT CGTTGAGGAT GACCCGGAGA TCACATCGGC TCTCGTCAGA
GGGCTGGCCC TACATGGCTA CGAGGCGGAG GCTGAGAATC GCGCGGATCG CGCGCTCAGC
CGCCTGACGG CAGGGATTTA CTCCGGCGCT ATCGTTGACG TGATGCTCGG CTCGGATTCC
GGCGTCGAGC TTGTGAGGAC CGCCCGCGCC CATGGCGCGA CATTGCCGAT CCTGATGCTC
TCCGCCCTGT CGGGCGTGGA AGATCGTGCC ACGGGACTGG CGGCAGGAGC AGATGACTAC
GTGGTCAAAC CGTTCCACTT CGATGAGCTT GTCGCGCGGT TGCGCGTGCA AGAGCATAGG
GCGCTGGCAC AGCGTGTCAG CCCTGCCCGC CTGATCCGGA CCTCGCGCCG CCTCGAGATG
GGTCCCGACA GCGTGACCCT GACTGAGCGG GAGTTCGATC TGCTTGCGCT TCTGATCCGA
TCCGGAGAAG ATCCGCAACC GCGGAGCCAG CTTCATGCCA CGCTCTGGGC CGCCGAGGGC
GCGAGTACTG AAAACGTCGT TGACGTCTAT GTGGGCTATC TGCGCCGCAA GCTGGAAACT
GCTGATTTCG GTTTTGAAAT CAAGACAGTC CGAAACCGTG GGTTTTGCAT CTCAGGGCGT
CGCCCGGAAC TCTTGGAGAG CTGA
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| Protein sequence | MTSRLLIVED DPEITSALVR GLALHGYEAE AENRADRALS RLTAGIYSGA IVDVMLGSDS
GVELVRTARA HGATLPILML SALSGVEDRA TGLAAGADDY VVKPFHFDEL VARLRVQEHR
ALAQRVSPAR LIRTSRRLEM GPDSVTLTER EFDLLALLIR SGEDPQPRSQ LHATLWAAEG
ASTENVVDVY VGYLRRKLET ADFGFEIKTV RNRGFCISGR RPELLES
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