Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0753 |
Symbol | |
ID | 8324916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 832249 |
End bp | 832974 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644941296 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003098561 |
Protein GI | 256374901 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.407347 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCGGTGA GGCCACGGGT GCTGGTAGTC GACGACGAGG TGGGCGTTCG CCGCGCCCTT GAGCGCGGGT TGGCCGCCGA GGGCATGGAG GTGGTCAGCG CCGCCGACGG CGACACGGCG CTGCGCGCGG CCCTGACCGG GGCGTTCGAC GTGGTCCTGC TGGACATCAT GCTGCCGGGG CTGTCCGGGT ACCGGGTGCT CCAGCGGATG CGCGCCGAGG GGGTGCGCAC GCCGGTGCTG ATGGTGTCGG CCAAGGACGG CGAGGTCGAC CAGGCCGACG GGCTCGACCT GGGCGCGGAC GGGTACCTGG TCAAGCCGTT CTCGTTCGTG GTGCTGGTCG CGCAGGTCAG GGCGCTGCTG CGGCGCGGGT CCGCCGAGCT GGCCAGGCGC AGGCTGAGGC TGGGCGAGCT GGTCGTGGAC CGGGCGGTGC GCGAGGTCAG CTGGGCGGGC GTGCCGGTGC CGCTGTCGCC GCGCGAGTAC GCGGTGCTGG ACGTGCTGGC CGGGCGCGCC GGGTCCGTCG TCACCAAGGA CGAGCTGCTG CGCACCGTGT GGGGCGACGA GCAGGCCGCC ACCCGCAACG CGGTCGAGGT GTACGTCGGG TACCTGCGGC GCAAGCTGGA GGCGGTCGGC GCGGGCGAGG TCGTGCGCAC CGTGCGCGGC CACGGCTACC TGGCGTCCGC GGGCGACCTG GACGCCTCGC TCGGTCCGGC GGTCAAGCGC AGGTGA
|
Protein sequence | MPVRPRVLVV DDEVGVRRAL ERGLAAEGME VVSAADGDTA LRAALTGAFD VVLLDIMLPG LSGYRVLQRM RAEGVRTPVL MVSAKDGEVD QADGLDLGAD GYLVKPFSFV VLVAQVRALL RRGSAELARR RLRLGELVVD RAVREVSWAG VPVPLSPREY AVLDVLAGRA GSVVTKDELL RTVWGDEQAA TRNAVEVYVG YLRRKLEAVG AGEVVRTVRG HGYLASAGDL DASLGPAVKR R
|
| |