| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3615 |
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| Symbol | |
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| ID | 6780479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | + |
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| Start bp | 4134188 |
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| End bp | 4134862 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642769610 |
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| Product | two component heavy metal response transcriptional regulator, winged helix family |
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| Protein accession | YP_002140403 |
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| Protein GI | 197119976 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCATCC TGATCGTCGA GGACGAACAA AAGGCCGCCA ACTATCTCAA GAAGGGGCTC
AGCGAAAACG GCTTCAGCGT GGACATAGCC AACGACGGCG AGGACGGGCT GCACCTGGCC
CTGACCGAGG TGTACAGCCT GATCATCCTC GACGTTATGC TCCCGATACG CGGCGGATGG
TCCATCATCA AGGAACTGCG CGCCGCGGGA AACGACGTCC CGGTCATCTT CCTGTCGGCG
CGCGACGAGG TGCACGACCG GGTGCACGGC CTGGAGCTTG GGGCCGACGA CTACCTGGTG
AAACCCTACG CCTTCTCCGA GCTTCTGGCC CGCATCCGCA TCATACTGCG CCGCTACCCG
CTGCAGCAGT CCGAGTCCAT GAAGCTGGCC GACCTGGAGC TGGACCTGAT CCGGCACAAG
GCCCGGCGCG GCGGCCGCTC GCTCGACCTC ACCGTCAAGG AATTCCAGCT CCTCGCCCTG
ATGCTGCACC GGCGCGGCGA GGTCTTGAGC CGCACCACCA TCTCCGAGCA GATCTGGGGC
ATCAACTTCG ACACCGACAC CAACGTGGTG GACGTGGCGA TCAGAAGGCT CAGGAAGAAG
GTCGACGACC CCTTCCCGGT CAAACTCATC CAAACCATCA GGGGAGTAGG CTATGTCCTC
GACGAGACCG CCTGA
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| Protein sequence | MRILIVEDEQ KAANYLKKGL SENGFSVDIA NDGEDGLHLA LTEVYSLIIL DVMLPIRGGW
SIIKELRAAG NDVPVIFLSA RDEVHDRVHG LELGADDYLV KPYAFSELLA RIRIILRRYP
LQQSESMKLA DLELDLIRHK ARRGGRSLDL TVKEFQLLAL MLHRRGEVLS RTTISEQIWG
INFDTDTNVV DVAIRRLRKK VDDPFPVKLI QTIRGVGYVL DETA
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