Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_1631 |
Symbol | |
ID | 3918740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | - |
Start bp | 1706922 |
End bp | 1707605 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640444372 |
Product | two component transcriptional regulator |
Protein accession | YP_496905 |
Protein GI | 87199648 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0039171 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATAC TCATCATCGA GGACGAGATC GAACTGGCGG GTGCCTTGCA CCGTGGCCTT ACCCAGGAAG GCTGCAAGGT CACCCTCGCG ACCGACGGCT CCACAGGGCT AGAGCTTGCA GCCTCCCTCG CATTCGACTT CATCCTGCTC GACGTGAACC TGCCGGACAT GGATGGTTTC GAAGTCTGCG CGCGCCTGCG CGAACAGGGT TCCACCATGC CGATCATCAT GGTTACGGCG CGTGACGAGA TTGCAGATCG CATTCGCGGG CTCAAGGGTG GCGCGGATGA TTACCTGACC AAGCCTTTCG CGTTCGAGGA ACTGCTGGCG CGCATGGACG CGATCAAGCG TCGCATGGCA CCCTCGCAAG GTGGCAAGGT ACAGCCCGAT GGACGGATCA CCGTCGGCGA CCTACACTTC GATCCGCGCA CGATGACCCT GACGAGGGCA GGCACGCCGG TGCAGCTCAC GGTCAAGGAA ATGGGTGTAC TGCGTCTCTT GATGGAATCG CCGGGCACGG TGATCTCGCG CACCGAAATC CTTCGCGCAG TCTGGGGAAT GGAGGACGAT CCCCTGACCA ACATTGTCGA AGTCTACCTG AGCCGACTGC GCCGCAAGCT CCACGCCCTC GGCCCGCCAG TGGTCGAAAA CGTGCGTGGC TTCGGGTACC GCCTGATCGC TTAA
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Protein sequence | MRILIIEDEI ELAGALHRGL TQEGCKVTLA TDGSTGLELA ASLAFDFILL DVNLPDMDGF EVCARLREQG STMPIIMVTA RDEIADRIRG LKGGADDYLT KPFAFEELLA RMDAIKRRMA PSQGGKVQPD GRITVGDLHF DPRTMTLTRA GTPVQLTVKE MGVLRLLMES PGTVISRTEI LRAVWGMEDD PLTNIVEVYL SRLRRKLHAL GPPVVENVRG FGYRLIA
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