Gene Saro_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_1631 
Symbol 
ID3918740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp1706922 
End bp1707605 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content62% 
IMG OID640444372 
Producttwo component transcriptional regulator 
Protein accessionYP_496905 
Protein GI87199648 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0039171 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATAC TCATCATCGA GGACGAGATC GAACTGGCGG GTGCCTTGCA CCGTGGCCTT 
ACCCAGGAAG GCTGCAAGGT CACCCTCGCG ACCGACGGCT CCACAGGGCT AGAGCTTGCA
GCCTCCCTCG CATTCGACTT CATCCTGCTC GACGTGAACC TGCCGGACAT GGATGGTTTC
GAAGTCTGCG CGCGCCTGCG CGAACAGGGT TCCACCATGC CGATCATCAT GGTTACGGCG
CGTGACGAGA TTGCAGATCG CATTCGCGGG CTCAAGGGTG GCGCGGATGA TTACCTGACC
AAGCCTTTCG CGTTCGAGGA ACTGCTGGCG CGCATGGACG CGATCAAGCG TCGCATGGCA
CCCTCGCAAG GTGGCAAGGT ACAGCCCGAT GGACGGATCA CCGTCGGCGA CCTACACTTC
GATCCGCGCA CGATGACCCT GACGAGGGCA GGCACGCCGG TGCAGCTCAC GGTCAAGGAA
ATGGGTGTAC TGCGTCTCTT GATGGAATCG CCGGGCACGG TGATCTCGCG CACCGAAATC
CTTCGCGCAG TCTGGGGAAT GGAGGACGAT CCCCTGACCA ACATTGTCGA AGTCTACCTG
AGCCGACTGC GCCGCAAGCT CCACGCCCTC GGCCCGCCAG TGGTCGAAAA CGTGCGTGGC
TTCGGGTACC GCCTGATCGC TTAA
 
Protein sequence
MRILIIEDEI ELAGALHRGL TQEGCKVTLA TDGSTGLELA ASLAFDFILL DVNLPDMDGF 
EVCARLREQG STMPIIMVTA RDEIADRIRG LKGGADDYLT KPFAFEELLA RMDAIKRRMA
PSQGGKVQPD GRITVGDLHF DPRTMTLTRA GTPVQLTVKE MGVLRLLMES PGTVISRTEI
LRAVWGMEDD PLTNIVEVYL SRLRRKLHAL GPPVVENVRG FGYRLIA