| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2156 |
|---|
| Symbol | |
|---|
| ID | 7116102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 2255289 |
|---|
| End bp | 2255996 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643524906 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002420931 |
|---|
| Protein GI | 218530115 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00956512 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0958311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC GCGTATTGAT CGTTGAGGAT GATATCGACA TCCGCGGCAT CCTGGCTCGC
GGCCTGGAGG CGGAAGGGTT TTCCGTCGGC GTGGCCGGCC GGGTCGAGGA CGCGCTGAGT
GCCGCCCGCG ACGAGGCGCC GGAGGCGGTG GTGCTCGACA TCACCCTGCC CGACGGTTCC
GGCCACGACG TCTGCCGCAG CTTGCGCGAG GGCGGCTATC CCGGCGCGAT CCTTTTCCTG
AGCGCCCGCG ACGAGGTGCG CGACCGGGCC GAGGGGCTGG CGCTCGGCGC CGACGACTAC
ATCATCAAGC CGTTCGTGTT CGACGAGCTG CTGGCCCGGC TCCAGGTCCA TCTGCTCCGC
CGCCGCGAGG CGGACACCCC GCGCACCGTC TTCACCGCCG GCCGCCTGAC CCTCGACGTC
AACATCCGCC AGGTCAGCTT CGGCGAGGCC TCCGCGCGCC TCACCCCGCG AGAGGCGGAG
CTGCTCGCCC TGCTGATGCA GGAGGTGAAC CGGCCGATCT CGCGCGGCGA GATTTTCGAC
CGGCTCTGGG CGAGCCAGGG CGGCCTCTCG CTCAACGTTG TCGATGTCTA TGTCGGCTAC
CTGCGCTCGA AGCTCTCGGA TTTCGTACGG CTGGGCGGCC CGGTGATCGT CACGGTGCGC
GGCAAGGGCT TCATGCTCGA TCTGCGCGGC CAGGATTTCC GCCACTGA
|
|---|
| Protein sequence | MTTRVLIVED DIDIRGILAR GLEAEGFSVG VAGRVEDALS AARDEAPEAV VLDITLPDGS
GHDVCRSLRE GGYPGAILFL SARDEVRDRA EGLALGADDY IIKPFVFDEL LARLQVHLLR
RREADTPRTV FTAGRLTLDV NIRQVSFGEA SARLTPREAE LLALLMQEVN RPISRGEIFD
RLWASQGGLS LNVVDVYVGY LRSKLSDFVR LGGPVIVTVR GKGFMLDLRG QDFRH
|
|---|
| |