More than 300 homologs were found in PanDaTox collection
for query gene Dtox_0948 on replicon NC_013216
Organism: Desulfotomaculum acetoxidans DSM 771



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013216  Dtox_0948  extracellular solute-binding protein family 3  100 
 
 
320 aa  658    Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.476623  normal  0.138146 
 
 
-
 
NC_010625  Bphy_5989  extracellular solute-binding protein  38.43 
 
 
324 aa  182  7e-45  Burkholderia phymatum STM815  Bacteria  normal  0.181889  normal 
 
 
-
 
NC_008391  Bamb_3502  extracellular solute-binding protein  36.73 
 
 
335 aa  166  5e-40  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3985  extracellular solute-binding protein  35.92 
 
 
327 aa  163  5.0000000000000005e-39  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.394348 
 
 
-
 
NC_007347  Reut_A1722  extracellular solute-binding protein  36.58 
 
 
347 aa  154  2e-36  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2909  amino acid ABC transporter periplasmic protein  32.84 
 
 
343 aa  98.6  1e-19  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.313507 
 
 
-
 
NC_007516  Syncc9605_1171  extracellular solute-binding protein  34.36 
 
 
283 aa  98.2  2e-19  Synechococcus sp. CC9605  Bacteria  normal  0.354139  normal  0.436461 
 
 
-
 
NC_008698  Tpen_0906  extracellular solute-binding protein  33.5 
 
 
279 aa  80.9  0.00000000000003  Thermofilum pendens Hrk 5  Archaea  normal  0.663665  n/a   
 
 
-
 
NC_009718  Fnod_1056  extracellular solute-binding protein  27.35 
 
 
250 aa  80.1  0.00000000000005  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000133402  n/a   
 
 
-
 
NC_012857  Rpic12D_4039  extracellular solute-binding protein family 3  27.8 
 
 
295 aa  78.6  0.0000000000001  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_3925  extracellular solute-binding protein family 3  27.8 
 
 
295 aa  78.6  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1779  extracellular solute-binding protein  29.13 
 
 
276 aa  77.4  0.0000000000003  Enterobacter sp. 638  Bacteria  normal  hitchhiker  0.00357898 
 
 
-
 
NC_009486  Tpet_0324  extracellular solute-binding protein  28.32 
 
 
246 aa  76.3  0.0000000000006  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0342  extracellular solute-binding protein  28.25 
 
 
246 aa  75.9  0.0000000000008  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009376  Pars_1328  extracellular solute-binding protein  31.25 
 
 
249 aa  75.5  0.000000000001  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.313303  normal  0.666491 
 
 
-
 
NC_010525  Tneu_1259  extracellular solute-binding protein  35.03 
 
 
295 aa  74.7  0.000000000002  Thermoproteus neutrophilus V24Sta  Archaea  normal  normal 
 
 
-
 
NC_008701  Pisl_1863  extracellular solute-binding protein  35.53 
 
 
292 aa  73.9  0.000000000003  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_009376  Pars_2011  extracellular solute-binding protein  31.9 
 
 
282 aa  73.2  0.000000000005  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.986691  normal 
 
 
-
 
NC_013411  GYMC61_2806  extracellular solute-binding protein family 3  27.17 
 
 
281 aa  73.2  0.000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010505  Mrad2831_2212  extracellular solute-binding protein  27.47 
 
 
267 aa  72.8  0.000000000007  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0814  extracellular solute-binding protein  26.86 
 
 
268 aa  72.4  0.000000000009  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00687374  normal  0.141124 
 
 
-
 
NC_010508  Bcenmc03_1593  extracellular solute-binding protein  28.19 
 
 
271 aa  71.6  0.00000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.227678  normal  0.74753 
 
 
-
 
NC_009073  Pcal_0178  extracellular solute-binding protein  32.84 
 
 
299 aa  72  0.00000000001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_007510  Bcep18194_A4762  ABC amino acid transporter, periplasmic ligand binding protein  28.19 
 
 
271 aa  71.6  0.00000000001  Burkholderia sp. 383  Bacteria  normal  0.739753  normal  0.149517 
 
 
-
 
NC_007953  Bxe_C0127  polar amino acid ABC transporter periplasmic ligand-binding protein  27.5 
 
 
272 aa  72  0.00000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6677  extracellular solute-binding protein  27.87 
 
 
277 aa  72  0.00000000001  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1137  extracellular solute-binding protein  28.19 
 
 
271 aa  71.6  0.00000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1617  extracellular solute-binding protein  28.19 
 
 
271 aa  71.6  0.00000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010525  Tneu_1767  extracellular solute-binding protein  33.86 
 
 
276 aa  71.2  0.00000000002  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.99488  normal 
 
 
-
 
NC_007651  BTH_I2450  extracellular solute-binding protein  27.87 
 
 
271 aa  71.2  0.00000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1538  extracellular solute-binding protein  28.19 
 
 
292 aa  70.5  0.00000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.133709  normal  0.898326 
 
 
-
 
NC_010084  Bmul_1621  extracellular solute-binding protein  28.19 
 
 
271 aa  70.9  0.00000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0810697  normal  0.181323 
 
 
-
 
NC_010814  Glov_0714  polar amino acid ABC transporter, inner membrane subunit  24.67 
 
 
755 aa  70.9  0.00000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05952  ABC amino acid transporter periplasmic ligand binding protein  29.61 
 
 
272 aa  70.5  0.00000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009616  Tmel_0470  extracellular solute-binding protein  27.11 
 
 
247 aa  70.5  0.00000000004  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2490  extracellular solute-binding protein family 3  26.75 
 
 
273 aa  70.5  0.00000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_011313  VSAL_II0445  extracellular solute-binding protein  31.87 
 
 
266 aa  70.5  0.00000000004  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1548  polar amino acid ABC transporter periplasmic ligand-binding protein  26.91 
 
 
272 aa  69.7  0.00000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.159181  normal  0.942345 
 
 
-
 
NC_008390  Bamb_1515  extracellular solute-binding protein  27.75 
 
 
271 aa  70.1  0.00000000005  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1476  extracellular solute-binding protein family 3  25.37 
 
 
286 aa  69.3  0.00000000008  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2482  extracellular solute-binding protein family 3  28.03 
 
 
311 aa  69.3  0.00000000008  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000146817 
 
 
-
 
NC_009674  Bcer98_0541  extracellular solute-binding protein  31.55 
 
 
275 aa  69.3  0.00000000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7227  extracellular solute-binding protein  26.25 
 
 
262 aa  68.6  0.0000000001  Burkholderia phymatum STM815  Bacteria  normal  0.24118  normal 
 
 
-
 
NC_003909  BCE_0708  amino acid ABC transporter, amino acid-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4271  extracellular solute-binding protein family 3  26.32 
 
 
278 aa  68.6  0.0000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_000216  amino acid ABC transporter amino acid-binding protein  29.71 
 
 
272 aa  68.2  0.0000000002  Vibrio sp. Ex25  Bacteria  normal  0.909844  n/a   
 
 
-
 
NC_005945  BAS0607  amino acid ABC transporter amino acid-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.510404  n/a   
 
 
-
 
NC_005957  BT9727_0552  glutamine ABC transporter substrate-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.368136  n/a   
 
 
-
 
NC_006274  BCZK0551  glytamine ABC transporter substrate-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0697  amino acid ABC transporter, amino acid-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007530  GBAA_0640  amino acid ABC transporter amino acid-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.223136  n/a   
 
 
-
 
NC_011658  BCAH187_A0769  amino acid ABC transporter, amino acid-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4662  amino acid ABC transporter, amino acid-binding protein  30.24 
 
 
276 aa  68.2  0.0000000002  Bacillus cereus G9842  Bacteria  normal  0.257219  hitchhiker  2.83751e-21 
 
 
-
 
NC_013421  Pecwa_4591  extracellular solute-binding protein family 3  26.32 
 
 
278 aa  67.8  0.0000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0202  amino acid ABC transporter, periplasmic amino acid-binding protein  31.55 
 
 
278 aa  67.4  0.0000000003  Vibrio cholerae O395  Bacteria  normal  0.55601  n/a   
 
 
-
 
NC_008025  Dgeo_1959  extracellular solute-binding protein  31.95 
 
 
222 aa  67.4  0.0000000003  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.553895 
 
 
-
 
NC_011725  BCB4264_A0676  amino acid ABC transporter, amino acid-binding protein  30.24 
 
 
276 aa  67.4  0.0000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2760  extracellular solute-binding protein  30.77 
 
 
277 aa  67.4  0.0000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1883  putative amino acid ABC transporter, periplasmic amino acid-binding protein  26.64 
 
 
271 aa  67  0.0000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1895  putative amino acid ABC transporter, periplasmic amino acid-binding protein  26.64 
 
 
271 aa  67  0.0000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.299924  n/a   
 
 
-
 
NC_002939  GSU0800  amino acid ABC transporter, periplasmic amino acid-binding protein  31.02 
 
 
256 aa  67  0.0000000004  Geobacter sulfurreducens PCA  Bacteria  normal  0.38805  n/a   
 
 
-
 
NC_007434  BURPS1710b_2051  extracellular solute-binding protein  26.64 
 
 
271 aa  67  0.0000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.0325389  n/a   
 
 
-
 
NC_008836  BMA10229_A0326  polar amino acid ABC uptake transporter substrate binding protein  26.64 
 
 
271 aa  67  0.0000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.178009  n/a   
 
 
-
 
NC_009080  BMA10247_0835  extracellular solute-binding protein  26.64 
 
 
271 aa  67  0.0000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.447071  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1670  extracellular solute-binding protein  26.64 
 
 
271 aa  67  0.0000000004  Burkholderia mallei SAVP1  Bacteria  normal  0.720486  n/a   
 
 
-
 
NC_013512  Sdel_0124  extracellular solute-binding protein family 3  26.64 
 
 
266 aa  66.2  0.0000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3110  extracellular solute-binding protein family 3  28.51 
 
 
278 aa  66.2  0.0000000006  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0553  extracellular solute-binding protein  29.76 
 
 
276 aa  66.6  0.0000000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_4004  extracellular solute-binding protein family 3  28.09 
 
 
278 aa  65.9  0.0000000009  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_37210  periplasmic component of amino acid ABC-type transporter/signal transduction system  26.94 
 
 
324 aa  65.9  0.0000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.734714  normal  0.110319 
 
 
-
 
NC_008785  BMASAVP1_A1737  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  65.1  0.000000001  Burkholderia mallei SAVP1  Bacteria  normal  0.084035  n/a   
 
 
-
 
NC_006348  BMA1254  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  65.1  0.000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1977  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
284 aa  65.5  0.000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1824  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  65.1  0.000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0726824  n/a   
 
 
-
 
NC_009080  BMA10247_0767  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  65.1  0.000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0133342  n/a   
 
 
-
 
NC_009074  BURPS668_1808  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  65.1  0.000000001  Burkholderia pseudomallei 668  Bacteria  normal  0.655664  n/a   
 
 
-
 
NC_008390  Bamb_0100  prephenate dehydratase  25.97 
 
 
270 aa  65.5  0.000000001  Burkholderia ambifaria AMMD  Bacteria  normal  0.688966  n/a   
 
 
-
 
NC_008531  LEUM_0655  ABC-type amino acid transport system, permease and periplasmic component  28.09 
 
 
490 aa  65.1  0.000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.00122809  n/a   
 
 
-
 
NC_008701  Pisl_0357  extracellular solute-binding protein  35.76 
 
 
270 aa  65.9  0.000000001  Pyrobaculum islandicum DSM 4184  Archaea  normal  normal 
 
 
-
 
NC_011830  Dhaf_3796  extracellular solute-binding protein family 3  25.1 
 
 
281 aa  65.5  0.000000001  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0150584  n/a   
 
 
-
 
NC_011886  Achl_2522  extracellular solute-binding protein family 3  25.74 
 
 
295 aa  65.5  0.000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000888885 
 
 
-
 
NC_008836  BMA10229_A0395  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  65.1  0.000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.364587  n/a   
 
 
-
 
NC_004116  SAG1431  amino acid ABC transporter, amino acid-binding protein  29.47 
 
 
268 aa  64.7  0.000000002  Streptococcus agalactiae 2603V/R  Bacteria  unclonable  0.0000284109  n/a   
 
 
-
 
NC_007651  BTH_I2512  amino acid ABC transporter, periplasmic amino acid-binding protein  31.25 
 
 
264 aa  64.3  0.000000003  Burkholderia thailandensis E264  Bacteria  normal  0.226859  n/a   
 
 
-
 
NC_008531  LEUM_0122  amino acid ABC transporter periplasmic protein  26.5 
 
 
281 aa  64.3  0.000000003  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_4213  extracellular solute-binding protein family 3  26.81 
 
 
278 aa  64.3  0.000000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_4165  polar amino acid ABC transporter periplasmic amino acid-binding protein  27.57 
 
 
284 aa  63.5  0.000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_4237  extracellular solute-binding protein  27.57 
 
 
284 aa  63.5  0.000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A4191  polar amino acid ABC transporter periplasmic amino acid-binding protein  27.57 
 
 
284 aa  63.5  0.000000004  Yersinia pestis Angola  Bacteria  normal  normal  0.0122303 
 
 
-
 
NC_013173  Dbac_1818  extracellular solute-binding protein family 3  25.55 
 
 
273 aa  63.2  0.000000005  Desulfomicrobium baculatum DSM 4028  Bacteria  hitchhiker  0.0079129  n/a   
 
 
-
 
NC_013517  Sterm_1539  extracellular solute-binding protein family 3  25.97 
 
 
283 aa  63.2  0.000000006  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000000136922  n/a   
 
 
-
 
NC_014158  Tpau_3754  extracellular solute-binding protein family 3  24.21 
 
 
326 aa  63.2  0.000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.807307  n/a   
 
 
-
 
NC_013510  Tcur_0186  extracellular solute-binding protein family 3  28.74 
 
 
279 aa  63.2  0.000000006  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0109  arogenate dehydratase  25.4 
 
 
270 aa  63.2  0.000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.224766  normal 
 
 
-
 
NC_013385  Adeg_2053  extracellular solute-binding protein family 3  27.31 
 
 
271 aa  62.8  0.000000007  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2153  extracellular solute-binding protein family 3  23.89 
 
 
273 aa  62.8  0.000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal  0.0684055 
 
 
-
 
NC_009832  Spro_0017  extracellular solute-binding protein  25.83 
 
 
279 aa  62.8  0.000000008  Serratia proteamaculans 568  Bacteria  normal  0.822209  normal  0.141798 
 
 
-
 
NC_011769  DvMF_1344  extracellular solute-binding protein family 3  28.74 
 
 
272 aa  62.4  0.000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.752805 
 
 
-
 
NC_008060  Bcen_2945  prephenate dehydratase  25.4 
 
 
270 aa  62.4  0.000000009  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0273907  n/a   
 
 
-
 
NC_008542  Bcen2424_0110  prephenate dehydratase  25.4 
 
 
270 aa  62.4  0.000000009  Burkholderia cenocepacia HI2424  Bacteria  normal  0.433262  n/a   
 
 
-
 
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