Gene Pisl_1863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_1863 
Symbol 
ID4617735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp1687891 
End bp1688769 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content52% 
IMG OID639784950 
Productextracellular solute-binding protein 
Protein accessionYP_931354 
Protein GI119873347 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCTG TGGCTGTCTC AATAGCGGCG TTGCTCATAG GTCTCGTCTT GGGCTACCTC 
GTTGGCTTCT CCACGGCGCC GAAGGCTTCC ATAGCGGCTA CAACCACTAC GCCGAGCGCT
ACTGCGACAA CTGCCACGCC CTCCTCTCCC CAAGCGGCTT GTCCAGTTTC TGTCGACGTT
ATTAAGAAGA GGGGGAAGTT AATAGTTGGC ACAGACGCCA CGTGGCCTCC CTGGGAATGG
GTTATGGGCG ACAAGATAGT GGGCTGGGAT ATAGACATCG CCCGCGAGAT CGCGAAGGCC
CTGGGGGTTC AGCTGGAGAT TAGAGATATG AGATTCGCCG GCCTTTTAGA GGCCGTTAGG
AAGGGGGACG TGGATCTGGC CATCAGCGCC ATCACCTGGA CTTCTGAGAG GGAGAAAGTC
CTCGAGTTCT CCATGCCGTA TTATCTGGAG TCTATAGTAG TTGTGACTAA GGCTTCGCGC
ACAGATATAA ACAAAGTGGA AGATCTCTAT GGCAAGACCG TGGGTGTACA AATCGGCACA
ACCCACGAAG AGTGGGCGGC TACAAACTTG GAGAAGCCCG GGAAGGCGAC TGTGAGAAGG
TACGACAAGG TGTACCCCTA TATGGTCGAG GTGTTGAAGA GAGGCGACGT AGACGCGATA
ATCCTAGACC GCTCCATCGC CACAGCTCTT GTTAGAAAAT TCCCCGATCT CAAGATCGCG
TTTGAGCTTC CTGGTTCTGC AGGTTACATC TCGGTGGCTA TGCCTAAATG TGCCCAAGAT
CTTAAGCTAG TTGTAGATCA AGTAATTGAG AATCTTATGC AAACTGGTAA ATTAGACGAG
ATTTTCCAGC GGAATTTCGA GCTATTTCTA CAGTCGTAA
 
Protein sequence
MKSVAVSIAA LLIGLVLGYL VGFSTAPKAS IAATTTTPSA TATTATPSSP QAACPVSVDV 
IKKRGKLIVG TDATWPPWEW VMGDKIVGWD IDIAREIAKA LGVQLEIRDM RFAGLLEAVR
KGDVDLAISA ITWTSEREKV LEFSMPYYLE SIVVVTKASR TDINKVEDLY GKTVGVQIGT
THEEWAATNL EKPGKATVRR YDKVYPYMVE VLKRGDVDAI ILDRSIATAL VRKFPDLKIA
FELPGSAGYI SVAMPKCAQD LKLVVDQVIE NLMQTGKLDE IFQRNFELFL QS