Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_1863 |
Symbol | |
ID | 4617735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 1687891 |
End bp | 1688769 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639784950 |
Product | extracellular solute-binding protein |
Protein accession | YP_931354 |
Protein GI | 119873347 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCTG TGGCTGTCTC AATAGCGGCG TTGCTCATAG GTCTCGTCTT GGGCTACCTC GTTGGCTTCT CCACGGCGCC GAAGGCTTCC ATAGCGGCTA CAACCACTAC GCCGAGCGCT ACTGCGACAA CTGCCACGCC CTCCTCTCCC CAAGCGGCTT GTCCAGTTTC TGTCGACGTT ATTAAGAAGA GGGGGAAGTT AATAGTTGGC ACAGACGCCA CGTGGCCTCC CTGGGAATGG GTTATGGGCG ACAAGATAGT GGGCTGGGAT ATAGACATCG CCCGCGAGAT CGCGAAGGCC CTGGGGGTTC AGCTGGAGAT TAGAGATATG AGATTCGCCG GCCTTTTAGA GGCCGTTAGG AAGGGGGACG TGGATCTGGC CATCAGCGCC ATCACCTGGA CTTCTGAGAG GGAGAAAGTC CTCGAGTTCT CCATGCCGTA TTATCTGGAG TCTATAGTAG TTGTGACTAA GGCTTCGCGC ACAGATATAA ACAAAGTGGA AGATCTCTAT GGCAAGACCG TGGGTGTACA AATCGGCACA ACCCACGAAG AGTGGGCGGC TACAAACTTG GAGAAGCCCG GGAAGGCGAC TGTGAGAAGG TACGACAAGG TGTACCCCTA TATGGTCGAG GTGTTGAAGA GAGGCGACGT AGACGCGATA ATCCTAGACC GCTCCATCGC CACAGCTCTT GTTAGAAAAT TCCCCGATCT CAAGATCGCG TTTGAGCTTC CTGGTTCTGC AGGTTACATC TCGGTGGCTA TGCCTAAATG TGCCCAAGAT CTTAAGCTAG TTGTAGATCA AGTAATTGAG AATCTTATGC AAACTGGTAA ATTAGACGAG ATTTTCCAGC GGAATTTCGA GCTATTTCTA CAGTCGTAA
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Protein sequence | MKSVAVSIAA LLIGLVLGYL VGFSTAPKAS IAATTTTPSA TATTATPSSP QAACPVSVDV IKKRGKLIVG TDATWPPWEW VMGDKIVGWD IDIAREIAKA LGVQLEIRDM RFAGLLEAVR KGDVDLAISA ITWTSEREKV LEFSMPYYLE SIVVVTKASR TDINKVEDLY GKTVGVQIGT THEEWAATNL EKPGKATVRR YDKVYPYMVE VLKRGDVDAI ILDRSIATAL VRKFPDLKIA FELPGSAGYI SVAMPKCAQD LKLVVDQVIE NLMQTGKLDE IFQRNFELFL QS
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