Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMASAVP1_A1737 |
Symbol | |
ID | 4680542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei SAVP1 |
Kingdom | Bacteria |
Replicon accession | NC_008785 |
Strand | + |
Start bp | 1721040 |
End bp | 1721834 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639846002 |
Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
Protein accession | YP_993059 |
Protein GI | 121601368 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.084035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTG CGTCGCTGAA GAAGCTTCTG GTCACCGGCC TGATCGGCGC GTCGTTCGCC GCCGCCACCG CGCACGCGGC GGATCTGCTC GACGAAGTCA AGCAACGCGG CACGCTGCGC ATCGGCCTCG AGGGCACGTT CCCGCCGTTC AACTCGAAGA ATCCGCAAGG CGAGCTCGTC GGCTTCGACG TCGACATCGC GAAGGCGATC GCCGCGAAGC TCGGCGTGAA GCCGGAATTC GTCACGACCG AATGGAGCGG CATCATCGCG GGCCTGCAGG CGGGCAAGTT CGACGTGATC GTCAACCAGG TCGGCATCAC CGACCCGCGC AAGCAGACGC TCGACTTCTC GCCGGCGTAC ACGTTCTCGT CCGCGCAGCT GATCCAGCGC AAGGACGACG CGCGCCAGTT CAAGTCGCTC GAGGACCTGA AGGGCAAGAA GCTCGGCGTC GCGCTCGGCA CGAACTACAT GGACATGGCG AAATCGGTGC CGGGCATCGA CGTGAAGACG TATCCGGGCG CGCCCGAGTA TCTGCGCGAC CTCGCGGCGG GCCGCCTCGA CGCGGCGCTC AACGATCGCC TGATGCTCGC GTATCTGACG AAGAACGCGC AGCTGCCGCT GCGCCCGGGC GCGAACGTCG GCTCGGCGAA CCCGTCGGGC ATTCCGTTCA AGAAGGGCAA TCCGAAGTTC GCGAAGGCAA TCGCCGATGC GATGACCCAG CTCGAAGCCG ACGGCACGTT CACGAAGATC TCCGACAAGT GGTTCGGCAT CGACGTGACG AAGCCCGTCA AGTGA
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Protein sequence | MKIASLKKLL VTGLIGASFA AATAHAADLL DEVKQRGTLR IGLEGTFPPF NSKNPQGELV GFDVDIAKAI AAKLGVKPEF VTTEWSGIIA GLQAGKFDVI VNQVGITDPR KQTLDFSPAY TFSSAQLIQR KDDARQFKSL EDLKGKKLGV ALGTNYMDMA KSVPGIDVKT YPGAPEYLRD LAAGRLDAAL NDRLMLAYLT KNAQLPLRPG ANVGSANPSG IPFKKGNPKF AKAIADAMTQ LEADGTFTKI SDKWFGIDVT KPVK
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