| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_0814 |
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| Symbol | |
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| ID | 4460175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1007616 |
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| End bp | 1008422 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639701576 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_844946 |
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| Protein GI | 116748259 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00687374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.141124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAA AATGTCTATC CGCACTTTGG GTTCCGGCGC TTCTGCTGAC CTGCGGAATC
GCCTTTGCCG TGACGCCCTT CGAAGTCTTC GACGGGAGCG TCCTCAACCA GGTGATCAAG
CGCAACAAGC TGATGGTCGG AATGGAAGTA AAATTCTTCC CCTTTGAATA CGCTGACGAA
AAAGGCCGGC CATTGGGATT CGACGTGGAA ATCGCCGGGC TCGCGGCAAA GGAACTGGGC
GTGGAACTGG AAATCAAGGA CATGGAATTC AGCGGTCTCA TCCCCGCTTT GCAGGGCGGC
AAGGTGGACA TGATCATCTC CGGGATGACG AGGACGCTGA CGAGGGCCAA AACGGTGAGC
TTTACGCAGG CGTACTTCGA GACGGGGTTG TGTGCCCTGT TGAGCAACAG GAGGGCCCCT
GACGTCAAGG ACGTCAAGGA GTTGAACGCC CCGGGCCGGG TGATCGCCGT CAAGCTCGGC
ACCACCGGGG ACCTGGTTAC GGCGAAGATG TTTCCCGAGG CACAGGTCAA CCGTTACAAG
GAAGAGACGG CATGCGTGCG AGAAGTGGTG ACGGGAAGGG CCGACGCGTT CCTCTACGAT
CAACTGTCCA TCGGCAAGCA TCACAAGGAA AATCCCGATA CGACTCACGC CGTGCTGACG
CCGTTCACCT ACGAACCTTT TGCCATAGCG ATCCGCAAGG GAGACCCCGA TTTTCTGAAC
TGGCTGAACC AGTTCCTCGA AACCATAAAG GCGGACGGAC GCTACCGCGA GCTTCACGAG
AAGCACTTTG GCGATATTCT GCGCTGA
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| Protein sequence | MFRKCLSALW VPALLLTCGI AFAVTPFEVF DGSVLNQVIK RNKLMVGMEV KFFPFEYADE
KGRPLGFDVE IAGLAAKELG VELEIKDMEF SGLIPALQGG KVDMIISGMT RTLTRAKTVS
FTQAYFETGL CALLSNRRAP DVKDVKELNA PGRVIAVKLG TTGDLVTAKM FPEAQVNRYK
EETACVREVV TGRADAFLYD QLSIGKHHKE NPDTTHAVLT PFTYEPFAIA IRKGDPDFLN
WLNQFLETIK ADGRYRELHE KHFGDILR
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