| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3985 |
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| Symbol | |
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| ID | 6179468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 987998 |
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| End bp | 988981 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641683755 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001810666 |
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| Protein GI | 172063015 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.394348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCT TTTCCGGACG CGCCGCGCGC GCGCTACTTG CGTGGTGCCG CGACATTTTC
CTCGTGCGCC GATGCGTGCG TCGGCACTGG CGCGGCGCGG CCTGCGCATT CATCGCCGTG
TCGTGCGGCG CACCGGCGCT GGCCCTCGAT GCAACCGCGC CGGCCGCGAC GGCCACGCCC
GCGACCACGA CCGCGCCCGC CACCACGGCC ACCACCGCCA CCGGCCTCGT GCCGCTGCCC
GACGGCCGGC TGCTTGCGCC CGAGTTCGCG CGCATCGTCA CGCGCGGCAC GCTCGTCGTC
GCGGTGCTCG GCGTCGACCA GCCGCCGTTC TTCTGGTCGC GCAACGGCGC GTTGGCGGGC
GTCGACATCG ACCTCGCCGA CGAGCTCGCG AAAAAGCTCG GCGTGTCCGT GCAGTTCGAC
CGCGACGCGC GCACCTTCGA CGACGTCGTT CATCTGCTCG CGACCGGGCA GGCCGACGTC
GCGATCAGCA AGCTGTCGCG CACGTTGCCG CGGGCGCAGG TGGTCAGCTT CAGCACGCCG
TACATCAGCC TGCGGCGCGC GCTGCTGATC AACCGGGTCA GCTTCGCGGA ACTCGCGAAA
GGGCGGCCGC TGCCGGAAGT CGTGCGTGAC TACCGCGGCA CGATCGGCGT CGTCGCGCGC
TCGGCCTACG CCGACTACGT GCGCAACGAC TTCCCGGCCG CGCAGGTGCG CACCTATCCG
AGCTGGTCGG CGACGCTCGA CGCGCTGAAC GCCGGGGCGG TCACGGCCGT GTATCGCGAC
GAGCTCGCGA TCAAGCTCGT GATGCAGGAC GACCCGAGCG CGCCGATCCG GCTGCGCGTC
GCGACCTTCG ACGACCTGAC CGACGCGCTG GCCGTCGGCG TGCCGGTGTC CGCGCCGACG
CTGCTCGCGT TCGTCAACCA GTTCCTGGCC GAGCGCAACA AGCGGCTCGA CGTGAAATCC
CTGCTCGATG CGATGGGCCA CTGA
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| Protein sequence | MNLFSGRAAR ALLAWCRDIF LVRRCVRRHW RGAACAFIAV SCGAPALALD ATAPAATATP
ATTTAPATTA TTATGLVPLP DGRLLAPEFA RIVTRGTLVV AVLGVDQPPF FWSRNGALAG
VDIDLADELA KKLGVSVQFD RDARTFDDVV HLLATGQADV AISKLSRTLP RAQVVSFSTP
YISLRRALLI NRVSFAELAK GRPLPEVVRD YRGTIGVVAR SAYADYVRND FPAAQVRTYP
SWSATLDALN AGAVTAVYRD ELAIKLVMQD DPSAPIRLRV ATFDDLTDAL AVGVPVSAPT
LLAFVNQFLA ERNKRLDVKS LLDAMGH
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