Gene Pisl_0357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPisl_0357 
Symbol 
ID4616791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum islandicum DSM 4184 
KingdomArchaea 
Replicon accessionNC_008701 
Strand
Start bp351417 
End bp352229 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID639783437 
Productextracellular solute-binding protein 
Protein accessionYP_929878 
Protein GI119871871 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACA AACTTGCCGC GGGGGTTGCC ATAGGGCTTA TAATCGGAGT TATAGCGACC 
ATGTTATTTA TCCCCCAGCC ACAGTCTCAA CAACAGAGCG CTCCGCCTTG TCCAACTTCT
CTAGATTTGA TAAAGAAGAG GGGGAAACTT ATAGTTGGAA CCTCCGCCGA CTGGCCGCCT
TATGAATATG TAGAAAGTGG AAAAATCGTA GGTATTGATA TAGATATCGC CAGAAGAATT
GCAGATAGTC TCGGAGTCCA GCTTGAAATA CGTGATATGA AGTTTTCAGC ACTTATAGAA
GCTGTCAGAA AGGGAGATGT CGATTTTGTT ATAGCCGACA TGGCTATAAC ACCTGAGAGA
GAAAAACAAG TCCTCTTTTC TATTCCATAT CAGGTAGATT CGTCTACTGT TGTTGTAAAG
AAGGGAACAC AAATTAGAAG CGTAGAGGAT CTAAGAGGCA AGACCATCGG CGTACAAGTG
GGAACTGTAC AAGAGGATTG GGCTGTTAGA ACCCTCGGCA ACTATTCAAA AATTGTGAGA
TATGACAGAG TGTATCCCTA TATGGTTGAG GCTTTGCGTA AAGGCGATGT CGATGCGATT
GTCGTCGGGG GAGTTGTTGG AGATGCAGTA GTTAAAAGAT TTCCAGAGTT TGAAAAAGCG
TTTTCAGTAG GAGTGCGCTA CAGCGCTGTT GCAATGCCGA TATGTGCCTA CGATTTAAAA
CTACAAGTAG ATAAAGTGAT ATACGACATG TTACAAAGCG GCGAAATGGA GCGGCTGATA
AACAACTGGG TAGAGAAATG GCTCTATGGC TAA
 
Protein sequence
MDYKLAAGVA IGLIIGVIAT MLFIPQPQSQ QQSAPPCPTS LDLIKKRGKL IVGTSADWPP 
YEYVESGKIV GIDIDIARRI ADSLGVQLEI RDMKFSALIE AVRKGDVDFV IADMAITPER
EKQVLFSIPY QVDSSTVVVK KGTQIRSVED LRGKTIGVQV GTVQEDWAVR TLGNYSKIVR
YDRVYPYMVE ALRKGDVDAI VVGGVVGDAV VKRFPEFEKA FSVGVRYSAV AMPICAYDLK
LQVDKVIYDM LQSGEMERLI NNWVEKWLYG