Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pisl_0357 |
Symbol | |
ID | 4616791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum islandicum DSM 4184 |
Kingdom | Archaea |
Replicon accession | NC_008701 |
Strand | + |
Start bp | 351417 |
End bp | 352229 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639783437 |
Product | extracellular solute-binding protein |
Protein accession | YP_929878 |
Protein GI | 119871871 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTACA AACTTGCCGC GGGGGTTGCC ATAGGGCTTA TAATCGGAGT TATAGCGACC ATGTTATTTA TCCCCCAGCC ACAGTCTCAA CAACAGAGCG CTCCGCCTTG TCCAACTTCT CTAGATTTGA TAAAGAAGAG GGGGAAACTT ATAGTTGGAA CCTCCGCCGA CTGGCCGCCT TATGAATATG TAGAAAGTGG AAAAATCGTA GGTATTGATA TAGATATCGC CAGAAGAATT GCAGATAGTC TCGGAGTCCA GCTTGAAATA CGTGATATGA AGTTTTCAGC ACTTATAGAA GCTGTCAGAA AGGGAGATGT CGATTTTGTT ATAGCCGACA TGGCTATAAC ACCTGAGAGA GAAAAACAAG TCCTCTTTTC TATTCCATAT CAGGTAGATT CGTCTACTGT TGTTGTAAAG AAGGGAACAC AAATTAGAAG CGTAGAGGAT CTAAGAGGCA AGACCATCGG CGTACAAGTG GGAACTGTAC AAGAGGATTG GGCTGTTAGA ACCCTCGGCA ACTATTCAAA AATTGTGAGA TATGACAGAG TGTATCCCTA TATGGTTGAG GCTTTGCGTA AAGGCGATGT CGATGCGATT GTCGTCGGGG GAGTTGTTGG AGATGCAGTA GTTAAAAGAT TTCCAGAGTT TGAAAAAGCG TTTTCAGTAG GAGTGCGCTA CAGCGCTGTT GCAATGCCGA TATGTGCCTA CGATTTAAAA CTACAAGTAG ATAAAGTGAT ATACGACATG TTACAAAGCG GCGAAATGGA GCGGCTGATA AACAACTGGG TAGAGAAATG GCTCTATGGC TAA
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Protein sequence | MDYKLAAGVA IGLIIGVIAT MLFIPQPQSQ QQSAPPCPTS LDLIKKRGKL IVGTSADWPP YEYVESGKIV GIDIDIARRI ADSLGVQLEI RDMKFSALIE AVRKGDVDFV IADMAITPER EKQVLFSIPY QVDSSTVVVK KGTQIRSVED LRGKTIGVQV GTVQEDWAVR TLGNYSKIVR YDRVYPYMVE ALRKGDVDAI VVGGVVGDAV VKRFPEFEKA FSVGVRYSAV AMPICAYDLK LQVDKVIYDM LQSGEMERLI NNWVEKWLYG
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