| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1548 |
|---|
| Symbol | |
|---|
| ID | 4007963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007952 |
|---|
| Strand | + |
|---|
| Start bp | 1660343 |
|---|
| End bp | 1661161 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637951146 |
|---|
| Product | polar amino acid ABC transporter periplasmic ligand-binding protein |
|---|
| Protein accession | YP_553766 |
|---|
| Protein GI | 91778558 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.159181 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.942345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTCA GAGTACTCGG CGCCGTGATT GCCGGCAGTC TGCTTGTCAT GTCCGCTGCC
GCGCATGCGG ATCGTCTCGA CGACATCAAG AAAGCAGGCG TGCTGCGGGT GGCCGCATTC
GACAGCAATC CGCCGTTCGG CTTTGTCGAT CCGAAGAGCA ACCAGATTGT CGGGCTCGAC
ATCGATTATG CGCGCGCGGT CGCAAACCGC CTTGGCGTCA AACTCGAGGT CCAGCCGACC
AATCCGGCCA ACCGCATTGC TTTCCTGAAG TCGGGCAAGG TGGATCTGGT GTTCGCCAAC
TTCACGATTA CCGACGATCG CAAGAAGGAA GTGGATTTCA GCATTCCTTA TTTTGCGTCG
GGCACGCAAT TCATCGCGAA GAAGGGCACG CTCACCTCGC CGCAGCAATT GAACAGCTTG
CGGATCGGCG CGGACAAAGG CACGACCAAC GAGCAGCAGG TGCGTGCGCA ATTCCCGGGC
GCCACGATCA TTGCATACGA CGACACGCCG TTCGCATTCG CCGCGCTGCG CACGGGCAAC
GTGCAGGCGA TCACGCAGGA CGGGCCGAAG CTCGTCGCGT TGCTGGCGAA AGTGCCGGAC
AAGGCAAACT ACGAGATCCC GCCGTTCACG ATCTCCAACG ACTACGAAGG CGTGGGCGTG
CCGAAGGGCG AAACGCGTCT GCTCAACGTC GTCAACGATA CGTTGAAAGA TCTTGAAGCC
AAAGGCACCG CAGGCCAGAT CTACGACACG TGGTTCGGTC CGAAGAGCGC CGCGCCGCTG
CCGCGTCTGT TCAAGATCGG CGACCCGCAG AAGAGCTGA
|
|---|
| Protein sequence | MNLRVLGAVI AGSLLVMSAA AHADRLDDIK KAGVLRVAAF DSNPPFGFVD PKSNQIVGLD
IDYARAVANR LGVKLEVQPT NPANRIAFLK SGKVDLVFAN FTITDDRKKE VDFSIPYFAS
GTQFIAKKGT LTSPQQLNSL RIGADKGTTN EQQVRAQFPG ATIIAYDDTP FAFAALRTGN
VQAITQDGPK LVALLAKVPD KANYEIPPFT ISNDYEGVGV PKGETRLLNV VNDTLKDLEA
KGTAGQIYDT WFGPKSAAPL PRLFKIGDPQ KS
|
|---|
| |