| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4191 |
|---|
| Symbol | |
|---|
| ID | 5802671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 4482417 |
|---|
| End bp | 4483271 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641341958 |
|---|
| Product | polar amino acid ABC transporter periplasmic amino acid-binding protein |
|---|
| Protein accession | YP_001608461 |
|---|
| Protein GI | 162421777 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0122303 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGG ATCTTTCCAT AAAAAAAAGT GCAATAGCCT TAACGCTACT CGCGGGTCTA
GCTACACTTT CCGGCACTGC TTACGCTGAT AAGTTGGATG ATATCAAGCA AGCGGGTGTG
GTAAGGATTG CTGTTTTCGA TAGCAACCCC CCATTTGGTT ATATCGACCC GCAGACTAAA
AAGCTGGTGG GATACGATGT TGATGTGGCT AATGCTATTG CTAAGGATTT AGGGGTGAAA
GTGGAGTTAC GGGCGACCAA CCCGGCGAAC CGCATCCCAT TACTGGCTTC TAAAAAAGTG
GATTTGATTG CTGCCAATTT CACTATTACT GATGAACGCG CCAAAGAGGT GAACTTCAGC
CTGCCCTATT TTGCGACGGG TCAAAAATTT ATTGCTCGCA AAGGCGTATT AAAAACACCG
GAAGATATTG GTAAGTTACG TATTGGTGCA GACAAAGGCA CGGTACAGGA AATTACTTTA
CGTGAGCATT ATCCAACCGC GAAAGTGATC TCTTACGATG ATACACCGCT GGCATTCACC
GCCCTACGTA ATGGTAACGT TCAAGCTATC ACGCAGGATG ATGCAAAATT AGTGGGCCTG
CTGGGTAATA TCCCTGAAGC GCAAAAAGCA GATTTTGAGA TTTCACCTTT TAGTATCACC
AAAGAGTATC AGGGCGTTGG TATTCCTAAA GGCGAAGATC GCTTAACAGC AGTGGTTAAC
GAGACACTAA TTAAGCTGGA GAAAGAGGGT GACGCCGTGA AAATTTATGA TCGCTGGTTT
GGGCCGGAAA CCAATTCAGC ACAACCGCGT GGTGAGTTTA AATTTGCCCC GTTAGACCAA
CAGCCTAAAG CGTAA
|
|---|
| Protein sequence | MKQDLSIKKS AIALTLLAGL ATLSGTAYAD KLDDIKQAGV VRIAVFDSNP PFGYIDPQTK
KLVGYDVDVA NAIAKDLGVK VELRATNPAN RIPLLASKKV DLIAANFTIT DERAKEVNFS
LPYFATGQKF IARKGVLKTP EDIGKLRIGA DKGTVQEITL REHYPTAKVI SYDDTPLAFT
ALRNGNVQAI TQDDAKLVGL LGNIPEAQKA DFEISPFSIT KEYQGVGIPK GEDRLTAVVN
ETLIKLEKEG DAVKIYDRWF GPETNSAQPR GEFKFAPLDQ QPKA
|
|---|
| |