Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2945 |
Symbol | |
ID | 4093182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 3253459 |
End bp | 3254271 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638016240 |
Product | prephenate dehydratase |
Protein accession | YP_622814 |
Protein GI | 107024487 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0273907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGACAT TCGCCACGCT TGCCACGCTC GCTGCCGCTG CCGCGTTTTG CTGCGCCGCC GCGCACGCGC AGGGCACGAC CACGCCGGCG CCCGCGAGCG CCGCTGCCGC CGGCTCGCGG CTCGACGACG TGCTCGCGCG CGGCGCGCTG CGCGTGTGCA CGACGGGCGA CTACAAGCCG TATTCGTACT ATCGCGCGGA CGGCCGCTTC GAGGGCATCG ACATCGACAT GGCGGAATCG CTCGCGAAAT CGCTCGGCGT GAAGACCGAC TACGTGAAGA CGAGCTGGTC GAACCTCACC AACGACTTCG TCGCGAAATG CGACATCGCG GTAGGCGGCG TATCGACGAC GCTCGAGCGC CAGAAGCGCG TGTTCTTCAC GCAGCCGTAC GTGGTCGACG GCAAGACGCC GATCGTGCGC TGCGCGGATG CCGACAAGTA CCAGACCGTC GCGCAGATCG ACCGGCCCGA GACGCGGGTG ATCGTGAATC CGGGCGGCAC CAACGAGCGC TTCGCGAAGC AGTTCTTCAC GCACGCGAAC CTGACCGTCT TCCCGGACAA CGTGACGATC TTCAAGCAGA TCCTGGCGGG CAAGGCCGAC GTGATGGTGA CGGATGCGTC CGAGACGCTG CTGCAGCAAA AGCTGAATCC GGGCCTTTGC TCGGTGCATC CGGACAAGCC GTTCCAGTTC GGAGAGAAGG CGTACATGGT GCCGCGCGGC GACGTCACGT TCCAGCAGTA CGTCGACCAG TGGCTGCATC TCGCGCTGTC CACCGGCGAG TACCAGGCGA TTTCGGACAA GTGGCTGAAG TAA
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Protein sequence | MKTFATLATL AAAAAFCCAA AHAQGTTTPA PASAAAAGSR LDDVLARGAL RVCTTGDYKP YSYYRADGRF EGIDIDMAES LAKSLGVKTD YVKTSWSNLT NDFVAKCDIA VGGVSTTLER QKRVFFTQPY VVDGKTPIVR CADADKYQTV AQIDRPETRV IVNPGGTNER FAKQFFTHAN LTVFPDNVTI FKQILAGKAD VMVTDASETL LQQKLNPGLC SVHPDKPFQF GEKAYMVPRG DVTFQQYVDQ WLHLALSTGE YQAISDKWLK
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