Gene Bcen_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2945 
Symbol 
ID4093182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp3253459 
End bp3254271 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID638016240 
Productprephenate dehydratase 
Protein accessionYP_622814 
Protein GI107024487 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0273907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGACAT TCGCCACGCT TGCCACGCTC GCTGCCGCTG CCGCGTTTTG CTGCGCCGCC 
GCGCACGCGC AGGGCACGAC CACGCCGGCG CCCGCGAGCG CCGCTGCCGC CGGCTCGCGG
CTCGACGACG TGCTCGCGCG CGGCGCGCTG CGCGTGTGCA CGACGGGCGA CTACAAGCCG
TATTCGTACT ATCGCGCGGA CGGCCGCTTC GAGGGCATCG ACATCGACAT GGCGGAATCG
CTCGCGAAAT CGCTCGGCGT GAAGACCGAC TACGTGAAGA CGAGCTGGTC GAACCTCACC
AACGACTTCG TCGCGAAATG CGACATCGCG GTAGGCGGCG TATCGACGAC GCTCGAGCGC
CAGAAGCGCG TGTTCTTCAC GCAGCCGTAC GTGGTCGACG GCAAGACGCC GATCGTGCGC
TGCGCGGATG CCGACAAGTA CCAGACCGTC GCGCAGATCG ACCGGCCCGA GACGCGGGTG
ATCGTGAATC CGGGCGGCAC CAACGAGCGC TTCGCGAAGC AGTTCTTCAC GCACGCGAAC
CTGACCGTCT TCCCGGACAA CGTGACGATC TTCAAGCAGA TCCTGGCGGG CAAGGCCGAC
GTGATGGTGA CGGATGCGTC CGAGACGCTG CTGCAGCAAA AGCTGAATCC GGGCCTTTGC
TCGGTGCATC CGGACAAGCC GTTCCAGTTC GGAGAGAAGG CGTACATGGT GCCGCGCGGC
GACGTCACGT TCCAGCAGTA CGTCGACCAG TGGCTGCATC TCGCGCTGTC CACCGGCGAG
TACCAGGCGA TTTCGGACAA GTGGCTGAAG TAA
 
Protein sequence
MKTFATLATL AAAAAFCCAA AHAQGTTTPA PASAAAAGSR LDDVLARGAL RVCTTGDYKP 
YSYYRADGRF EGIDIDMAES LAKSLGVKTD YVKTSWSNLT NDFVAKCDIA VGGVSTTLER
QKRVFFTQPY VVDGKTPIVR CADADKYQTV AQIDRPETRV IVNPGGTNER FAKQFFTHAN
LTVFPDNVTI FKQILAGKAD VMVTDASETL LQQKLNPGLC SVHPDKPFQF GEKAYMVPRG
DVTFQQYVDQ WLHLALSTGE YQAISDKWLK