| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VIBHAR_05952 |
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| Symbol | |
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| ID | 5558860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio harveyi ATCC BAA-1116 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009784 |
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| Strand | + |
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| Start bp | 1139101 |
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| End bp | 1139919 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640910426 |
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| Product | ABC amino acid transporter periplasmic ligand binding protein |
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| Protein accession | YP_001448072 |
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| Protein GI | 156977166 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAT TCAAAGCGAC CATTACTGCA TTATTGGGGC TTGCGATTGC TTTACCTTCA
TTAGCCAATG AAGAAGCCGC AACGTCGAAC GTAGAGCAAA TCAAAGAGCG TGGCACGCTG
CGCGTTGGTA TGTCGACATT CGTGCCTTGG GCAATGCGTA ACAAACAAGG TGAACTGATT
GGTTTTGAAA TCGACGTGGC AAAACGCTTA GCCGCAGATT CAGGCCTCAA AGTCGAGTTT
GTCCCAACCG CATGGGACGG TATCATCCCT GCTCTGTTGG CTAAAAAGTT TGACGTGATC
ATCGGTGGTA TGTCGATAAC TCCAGAGCGT TCAAAGAGCG TGCTTTTCAC TGAGCCTTAT
TCGCACTCTG GCGTACAAGT AGCCGCCAAC AAAGAACTAG CAGAAGGTTT TAGCGAGTTC
TCAGATTTTA ACTCTCGCCG TGTGAAGATT GCCGCTCGTC GTGGCGCGTT CACTGTGCAA
GTAGCGCGTG AGACTTTCCC TAAAGCGAAG ATCCTTCAGT TCGATGACGA CGCTCAAGCA
TTCCAAGAAG TACTAAACGG CAATGCCCAC GCAGTGATCG CATCAAGCCC GAGACCAGAG
CACGAAGCGA TCGAGCACGC AGACAAATTG TTCATTCCGT TTTCAGAGCG TCTGTCAAAA
GGCAACGAAG CCTTCGCCGT GCGCCTAGGT GAGGAGGACA AAAAGGCCTT CTTCAACCAA
TGGATTGAAG CTCGTACACA AGACGGTTGG CTAGATGAAC GTTACGAGTA CTGGTTCTCG
ACGTTAGATT GGCAAGACCA AGTTGCACAA GGCCAATAG
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| Protein sequence | MKLFKATITA LLGLAIALPS LANEEAATSN VEQIKERGTL RVGMSTFVPW AMRNKQGELI
GFEIDVAKRL AADSGLKVEF VPTAWDGIIP ALLAKKFDVI IGGMSITPER SKSVLFTEPY
SHSGVQVAAN KELAEGFSEF SDFNSRRVKI AARRGAFTVQ VARETFPKAK ILQFDDDAQA
FQEVLNGNAH AVIASSPRPE HEAIEHADKL FIPFSERLSK GNEAFAVRLG EEDKKAFFNQ
WIEARTQDGW LDERYEYWFS TLDWQDQVAQ GQ
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