| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_0100 |
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| Symbol | |
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| ID | 4311228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 111705 |
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| End bp | 112517 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638147878 |
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| Product | prephenate dehydratase |
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| Protein accession | YP_771995 |
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| Protein GI | 115350156 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.688966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACAT TCGCCCCGCT GGCCGCGCTT GCCGCCGCCA CCCTGCTTTG CTGCGCCGCC
GCGCACGCTC AGACCGCCGC AGCCGCGTCC CCGGTCGCCG GCGCCAACGC CGGCTCGCGA
CTCGACGACG TGCTCGCCCG CGGCACGCTG CGCGTGTGCA CGACAGGCGA CTACAAGCCG
TATTCGTACT ACCGCACGGA CGGCCGCTTC GAGGGCATCG ACATCGACAT GGCCGAATCG
CTCGCGAAAT CGCTCGGCGT GAAGGCCCAG TTCGTGAAGA CGAGCTGGTC GAACCTCACC
AACGACTTCG TCGCGAAGTG CGATATCGCG GTGGGCGGCG TATCGACCAC GCTCGAGCGC
CAGAAGCGCG TGTTCTTCAC GCAGCCATAC GTGGTCGACG GCAAGACGGC GATCGCGCGC
TGCGCGGATG CAGACAAGTA CCAGACCGTC GCGCAGATCG ACCGGCCCGA GACCCGCGTG
ATCGTGAACC CGGGCGGCAC CAACGAGCGC TTCGCGAAGC AGTTCTTCAC GCACGCGAAC
CTCACCGTCT ATCCGGACAA CGTGACGATC TTCAAGCAGA TCCTCGCGGG TAAGGCGGAC
GTGATGGTGA CGGACGCGTC CGAGACGATG CTGCAGCAAA AGCTGAATCC GGGCCTCTGC
TCGGTGCATC CGGACAAGCC GTTCCAGTTC GGCGAAAAGG CGTACATGGT GCCCCGCGGC
GACGTCGCGT TCCAGCAGTA CGTCGACCAG TGGCTGCACC TCGCGCTGTC GAGCGGCGAG
TACCAGTCGA TCTCCGACAA GTGGCTGAAA TAA
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| Protein sequence | MKTFAPLAAL AAATLLCCAA AHAQTAAAAS PVAGANAGSR LDDVLARGTL RVCTTGDYKP
YSYYRTDGRF EGIDIDMAES LAKSLGVKAQ FVKTSWSNLT NDFVAKCDIA VGGVSTTLER
QKRVFFTQPY VVDGKTAIAR CADADKYQTV AQIDRPETRV IVNPGGTNER FAKQFFTHAN
LTVYPDNVTI FKQILAGKAD VMVTDASETM LQQKLNPGLC SVHPDKPFQF GEKAYMVPRG
DVAFQQYVDQ WLHLALSSGE YQSISDKWLK
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