Gene TRQ2_0342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_0342 
Symbol 
ID6091746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand
Start bp325706 
End bp326446 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID642487519 
Productextracellular solute-binding protein 
Protein accessionYP_001738381 
Protein GI170288143 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TACTCGTGGT TTTGGTTCTT CTGGTTTCGA TCGTGATCTT CTCTGGAGTC 
ATCAACGAGA TCAAAAGCAG AGGGTACCTG CTCGTTGGAC TCTCTGCGGA TTTTCCTCCG
TTCGAGTTCG TTGATGAGAG CGGAAACATC GTGGGTTTCG ATGTCGATCT CGCAAAGGAA
ATCGCGAGAA GACTCGGTGT TGAACTGAAG ATCGTCGATA TGACCTTCGA CGGACTCATT
CCGAGCTTGC TCACAAAGAA GATCGATGTG ATCATCTCCG GCATGACGAT CACAGAGGAG
AGAAAGAAGG TCGTGGCCTT CTCCGATCCG TACTTCGACG CAGGACAGGT CATCGTGGTG
AGGAAGGACA GCGACTTCCG ACCGAAGACC TACGAAGATC TCGTGGGGAA AACCGTGGCC
GTTCAGATCG GTACCACCGG AGACATAGAG GTTTCAAAGT ACGAAGGTAT CAAGGTCGTC
AGGTTCGATA AATTCACGGA CGCGTTTCTC GAACTGAAGA GAGGCCGAGC AGACGCGGTG
GTGCTGGACT CCGCCACGGC AAGGGCCTTT GTGGCGAAGA ATCCGGATCT TGTTATCTCG
AGTGGAGTGC TCTCCAGCGA GCAGTACGGT ATCGCCGTGA GGAAAGAGGA CACGGATCTT
CTGGAATTCA TCAACAGCGT TTTGAGAGAG CTCAAAAAGA GTCCGTACGA CGTGCTCATA
GAAAAATGGT TCTCAGAGTG A
 
Protein sequence
MKKLLVVLVL LVSIVIFSGV INEIKSRGYL LVGLSADFPP FEFVDESGNI VGFDVDLAKE 
IARRLGVELK IVDMTFDGLI PSLLTKKIDV IISGMTITEE RKKVVAFSDP YFDAGQVIVV
RKDSDFRPKT YEDLVGKTVA VQIGTTGDIE VSKYEGIKVV RFDKFTDAFL ELKRGRADAV
VLDSATARAF VAKNPDLVIS SGVLSSEQYG IAVRKEDTDL LEFINSVLRE LKKSPYDVLI
EKWFSE