Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4237 |
Symbol | |
ID | 6090634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4676415 |
End bp | 4677269 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641599336 |
Product | extracellular solute-binding protein |
Protein accession | YP_001722946 |
Protein GI | 170026441 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACAGG ATCTTTCCAT AAAAAAAAGT GCAATAGCCT TAACGCTACT CGCGGGTCTA GCTACACTTT CCGGCACTGC TTACGCTGAT AAGTTGGATG ATATCAAGCA AGCGGGTGTG GTAAGGATTG CTGTTTTCGA TAGCAACCCC CCATTTGGTT ATATCGACCC GCAGACTAAA AAGCTGGTGG GATACGATGT TGATGTGGCT AATGCTATTG CTAAGGATTT AGGGGTGAAA GTGGAGTTAC GGGCGACCAA CCCGGCGAAC CGCATCCCAT TACTGGCTTC TAAAAAAGTG GATTTGATTG CTGCCAATTT CACTATTACT GATGAACGCG CCAAAGAGGT GAACTTCAGC CTGCCCTATT TTGCGACGGG TCAAAAATTT ATTGCTCGCA AAGGCGTATT AAAAACACCG GAAGATATTG GTAAGTTACG TATTGGTGCA GACAAAGGCA CGGTACAGGA AATTACTTTA CGTGAGCATT ATCCAACCGC GAAAGTGATC TCTTACGATG ATACACCGCT GGCATTCACC GCCCTACGTA ATGGTAACGT TCAAGCTATC ACGCAGGATG ATGCAAAATT AGTGGGCCTG CTGGGTAATA TCCCTGAAGC GCAAAAAGCA GATTTTGAGA TTTCACCTTT TAGTATCACC AAAGAGTATC AGGGCGTTGG TATTCCTAAA GGCGAAGATC GCTTAACAGC CGTGGTTAAC GAGACACTAA TTAAGCTGGA GAAAGAGGGT GACGCCGTGA AAATTTATGA TCGCTGGTTT GGGCCGGAAA CCAATTCAGC ACAACCGCGT GGTGAGTTTA AATTTGCCCC GTTAGACCAA CAGCCTAAAG CGTAA
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Protein sequence | MKQDLSIKKS AIALTLLAGL ATLSGTAYAD KLDDIKQAGV VRIAVFDSNP PFGYIDPQTK KLVGYDVDVA NAIAKDLGVK VELRATNPAN RIPLLASKKV DLIAANFTIT DERAKEVNFS LPYFATGQKF IARKGVLKTP EDIGKLRIGA DKGTVQEITL REHYPTAKVI SYDDTPLAFT ALRNGNVQAI TQDDAKLVGL LGNIPEAQKA DFEISPFSIT KEYQGVGIPK GEDRLTAVVN ETLIKLEKEG DAVKIYDRWF GPETNSAQPR GEFKFAPLDQ QPKA
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