Gene Spro_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0017 
Symbol 
ID5604076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp16245 
End bp17084 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content57% 
IMG OID640935502 
Productextracellular solute-binding protein 
Protein accessionYP_001476255 
Protein GI157368266 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.822209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.141798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATC GCGTTTTGGC CTTAACTTTG TTAGCCAGCC TGACCAGCCT CGCCACCGGT 
GCCGCGCACG CGGACAAACT CGACGACATC AAGAAAGCCG GTGTAGTGCG TATCGCGGTG
TTCGACAGCA ATCCTCCGTT CGGTTATATC GATCCGCAAA GCAAAAAGCT GGTGGGCTAT
GACGTTGATG TGGCCGATGC GATCGGCAAG GCGCTGGGGG TGAAGGTGGA GCTGCGTGCC
ACTAACCCGG CCAACCGCAT TCCTTTGCTG GTGTCGAAAA AGGTCGATTT GATCGCCGCC
AACTTCACCA TTACTGACGA GCGCGCCAAG GAAGTGAACT TCAGCGTGCC GTACTTCGCT
ACCGGCCAGA AATTTATCGC CCATAAAGGC GTGCTGAAAA CCCCGGAAGA TATCAAAAAA
CTGCGTATCG GCGCGGACAA AGGCACGGTG CAGGAAATTA CCCTGCGTGA ACATTACCCG
ACGGCCAAAG TGATCTCTTA CGACGACACT CCGCTGGCGT TCGTCGCCCT GCGCAACGGC
AACGTGCAGG CGATCACCCA GGATGATGCC AAGCTGGTGG GCCTGCTCGG CAATCTACCG
GCGGCGCAAA AGGCAGATTT CGAGATCTCG CCGTTCAGCA TTACCAAAGA ATACCAGGGG
GTTGGCATTC CTAAAGGCGA AGACCGCCTG ACCGCCAGCG TTAACGACAC GCTGATCAAG
CTGGAAAAAG ACGGCGAAGC GGCGAAGATC TACGATCGCT GGTTTGGCCC GGAAACCAAA
ACCGCGCAGC CACGCGGCGA CTTCAAAATC GCGCCTTTGG ATCAACAGCC GAAGGCCTGA
 
Protein sequence
MKHRVLALTL LASLTSLATG AAHADKLDDI KKAGVVRIAV FDSNPPFGYI DPQSKKLVGY 
DVDVADAIGK ALGVKVELRA TNPANRIPLL VSKKVDLIAA NFTITDERAK EVNFSVPYFA
TGQKFIAHKG VLKTPEDIKK LRIGADKGTV QEITLREHYP TAKVISYDDT PLAFVALRNG
NVQAITQDDA KLVGLLGNLP AAQKADFEIS PFSITKEYQG VGIPKGEDRL TASVNDTLIK
LEKDGEAAKI YDRWFGPETK TAQPRGDFKI APLDQQPKA