Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spro_0017 |
Symbol | |
ID | 5604076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Serratia proteamaculans 568 |
Kingdom | Bacteria |
Replicon accession | NC_009832 |
Strand | + |
Start bp | 16245 |
End bp | 17084 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640935502 |
Product | extracellular solute-binding protein |
Protein accession | YP_001476255 |
Protein GI | 157368266 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.822209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.141798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACATC GCGTTTTGGC CTTAACTTTG TTAGCCAGCC TGACCAGCCT CGCCACCGGT GCCGCGCACG CGGACAAACT CGACGACATC AAGAAAGCCG GTGTAGTGCG TATCGCGGTG TTCGACAGCA ATCCTCCGTT CGGTTATATC GATCCGCAAA GCAAAAAGCT GGTGGGCTAT GACGTTGATG TGGCCGATGC GATCGGCAAG GCGCTGGGGG TGAAGGTGGA GCTGCGTGCC ACTAACCCGG CCAACCGCAT TCCTTTGCTG GTGTCGAAAA AGGTCGATTT GATCGCCGCC AACTTCACCA TTACTGACGA GCGCGCCAAG GAAGTGAACT TCAGCGTGCC GTACTTCGCT ACCGGCCAGA AATTTATCGC CCATAAAGGC GTGCTGAAAA CCCCGGAAGA TATCAAAAAA CTGCGTATCG GCGCGGACAA AGGCACGGTG CAGGAAATTA CCCTGCGTGA ACATTACCCG ACGGCCAAAG TGATCTCTTA CGACGACACT CCGCTGGCGT TCGTCGCCCT GCGCAACGGC AACGTGCAGG CGATCACCCA GGATGATGCC AAGCTGGTGG GCCTGCTCGG CAATCTACCG GCGGCGCAAA AGGCAGATTT CGAGATCTCG CCGTTCAGCA TTACCAAAGA ATACCAGGGG GTTGGCATTC CTAAAGGCGA AGACCGCCTG ACCGCCAGCG TTAACGACAC GCTGATCAAG CTGGAAAAAG ACGGCGAAGC GGCGAAGATC TACGATCGCT GGTTTGGCCC GGAAACCAAA ACCGCGCAGC CACGCGGCGA CTTCAAAATC GCGCCTTTGG ATCAACAGCC GAAGGCCTGA
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Protein sequence | MKHRVLALTL LASLTSLATG AAHADKLDDI KKAGVVRIAV FDSNPPFGYI DPQSKKLVGY DVDVADAIGK ALGVKVELRA TNPANRIPLL VSKKVDLIAA NFTITDERAK EVNFSVPYFA TGQKFIAHKG VLKTPEDIKK LRIGADKGTV QEITLREHYP TAKVISYDDT PLAFVALRNG NVQAITQDDA KLVGLLGNLP AAQKADFEIS PFSITKEYQG VGIPKGEDRL TASVNDTLIK LEKDGEAAKI YDRWFGPETK TAQPRGDFKI APLDQQPKA
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