| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_37210 |
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| Symbol | |
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| ID | 8389042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | - |
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| Start bp | 4043604 |
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| End bp | 4044578 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644977733 |
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| Product | periplasmic component of amino acid ABC-type transporter/signal transduction system |
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| Protein accession | YP_003135494 |
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| Protein GI | 257057662 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.734714 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.110319 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GATTGAGGAT CCGCACACGG CTCGGTCTGT TCGTGTCCCT GTTCGCCGTC
GCACTCGCGG GTTGTTCCTC CGGTGCGCAG CCGATCGACC CCGCGCCCGT GGGGGAGGTG
CAGCGTCCGT TCCCCGCCGG TACGGAGATC GACCCGGAAC TGGGTTCGGG CGGCGGGTCC
GAGGAGGACT GCGACCCCAC GGCGAGCCTG CGTCCGAACT CCTCGGTCCC GCCGGGGTCC
ACGATGGCGA AGATCAAGGA GCGTGGTCAC CTCATCGTCG GGGTGGACCA GAACACCTAT
CTGTTCGGCT TCCCCGACCC CGAGACCGGG AAGCTGAGCG GGTTCGACAT CGACATCGCG
AGGAAGATCG CGGAGGCGCT GCTGGGCAAC GCCGACGCCG TCCATTTCAA GGCCATCTCC
TCCGCCGAAC GTATCGACGC GTTGCGCAAC GGCGATGTCG ACATCGTCGT GCGCACGTTC
TCGATCACCT GCGACCGGCT CGAGGACATC AACTTCTCGA CGGTGTACTA CGTGGCGGGT
CAACGCGTCC TGGTACCGGT CGGTTCGACG GCGCGAGGGC TGTCCGACCT GGGCGATAAG
CGGGTGTGCG CGGCGAAGGA CTCGACGTCG TTGCGCAACA TCGCCGCCAG CAGGCCGAGG
CCGATCCCGG TGGCGGTGGA CGACTGGTCC GACTGCCTGG TGTTGCTCCA GCAGGGTCAG
GTGGATGCGA TCTCCACCGA CGACACCATC CTCGCGGGTC TGCGGGCACA GGATCGGACG
GGCACCAAGA TCGTCGGGGA GCCGTTCACC AAGGAGTACT ACGGGATCGG CATCCCCAAG
GAGAACGAGG ACATGGTGCG GTTCGTGAAC GCCGTGCTGG AGAATATCCG CGGCGGCGCG
TGGCAGGCCA GCTACGACCG GTGGTTGCGG GAGCACCTCG GTCCTGCCTC ACCACCCAAA
CCCGAGTACC GGTGA
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| Protein sequence | MTTRLRIRTR LGLFVSLFAV ALAGCSSGAQ PIDPAPVGEV QRPFPAGTEI DPELGSGGGS
EEDCDPTASL RPNSSVPPGS TMAKIKERGH LIVGVDQNTY LFGFPDPETG KLSGFDIDIA
RKIAEALLGN ADAVHFKAIS SAERIDALRN GDVDIVVRTF SITCDRLEDI NFSTVYYVAG
QRVLVPVGST ARGLSDLGDK RVCAAKDSTS LRNIAASRPR PIPVAVDDWS DCLVLLQQGQ
VDAISTDDTI LAGLRAQDRT GTKIVGEPFT KEYYGIGIPK ENEDMVRFVN AVLENIRGGA
WQASYDRWLR EHLGPASPPK PEYR
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