Gene Bphy_7227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_7227 
Symbol 
ID6248734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp1886601 
End bp1887389 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content62% 
IMG OID642598869 
Productextracellular solute-binding protein 
Protein accessionYP_001863271 
Protein GI186471953 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.24118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTGA TGCTCGCCAT CTCCAGCGCT GTGCGCGCCG ACCGTCTCGA CGACATCAAG 
AAAGCAGGCG TGCTGCGCGT CGCGACCTTC GACAGCAATC CACCTTTCGG TTTTGTCGAT
CCGAAGAGCA ATCAGATTGT CGGGCTCGAT GTCGACTATG CGCGCGCCGT GGCGAACAAG
CTTGGTGTGA AGCTGGAGAT CCAGCCGACC AATCCCGCGA ACCGCATCGC GTTTCTGAAG
TCGGGCAAGG TCGATCTCGT GTTCGCTAAC TTCACGATCA CCGACGAGCG CAAGAAAGAA
GTCGATTTCA GCACGCCGTA TTTCGCGTCG GGCACGCAGT TCATTGCGAA GAAGGGCGTG
CTGAAAACGC CGCAGCAGCT GAACAGCCTG CGCATCGGCG CGGACAAGGG CACCACGAAC
GAACAGCAGG TTCGCGCACA ATTCCCGGGC GCGACGATCG TCGCCTACGA CGACACGCCG
TTCGCATTCG CTGCGCTGCG CACAGGCAAC GTGCAGGTGA TCACGCAGGA CGGGCCGAAG
CTCGTCGCGC TGCTCGCGAA CGTGCCGGAT AAAGGCAGCT ACGAGATTTC CGCGTTCACG
ATTTCGAACG ACTACGAAGG TGTCGGCGTG CCGAAGGGCG AGACGCGTCT GCTGAACCTG
GTCGACGACA CGCTCAGAGG GCTCGAAGCG AACGGCACGG CAGGCAAGAT CTATGACGCG
TGGTTCGGCC CGGCGAGCCG TGCGCCGCTG CCGCGTCTGT TCAAGATCGG CGACCCGCAG
AAGAGCTGA
 
Protein sequence
MGLMLAISSA VRADRLDDIK KAGVLRVATF DSNPPFGFVD PKSNQIVGLD VDYARAVANK 
LGVKLEIQPT NPANRIAFLK SGKVDLVFAN FTITDERKKE VDFSTPYFAS GTQFIAKKGV
LKTPQQLNSL RIGADKGTTN EQQVRAQFPG ATIVAYDDTP FAFAALRTGN VQVITQDGPK
LVALLANVPD KGSYEISAFT ISNDYEGVGV PKGETRLLNL VDDTLRGLEA NGTAGKIYDA
WFGPASRAPL PRLFKIGDPQ KS