More than 300 homologs were found in PanDaTox collection
for query gene Dde_0694 on replicon NC_007519
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. G20



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007519  Dde_0694  response regulator receiver domain-containing protein  100 
 
 
129 aa  264  2.9999999999999995e-70  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.112111  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  42.02 
 
 
137 aa  99.8  1e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  40.65 
 
 
151 aa  93.2  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  39.47 
 
 
144 aa  92.4  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  42.48 
 
 
151 aa  92  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  44.34 
 
 
413 aa  91.3  4e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_014148  Plim_2084  sigma-54 factor interaction domain-containing protein  37.9 
 
 
477 aa  89.4  1e-17  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.327808  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  40.54 
 
 
127 aa  89.4  2e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  40.91 
 
 
143 aa  87  8e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  37.39 
 
 
144 aa  87  9e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_009483  Gura_3744  putative GAF sensor protein  37.5 
 
 
323 aa  86.7  1e-16  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  39.32 
 
 
470 aa  85.5  2e-16  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  38.33 
 
 
185 aa  85.5  2e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  38.33 
 
 
185 aa  85.5  2e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  38.33 
 
 
185 aa  85.5  2e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_004578  PSPTO_4553  DNA-binding response regulator  38.14 
 
 
187 aa  85.1  3e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.023221  n/a   
 
 
-
 
NC_011761  AFE_2901  nitrogen regulation protein NR(I)  37.17 
 
 
468 aa  85.1  3e-16  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  40.74 
 
 
139 aa  84.7  3e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_011206  Lferr_2519  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  37.17 
 
 
468 aa  85.1  3e-16  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  41.96 
 
 
153 aa  85.1  3e-16  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  40.71 
 
 
141 aa  84.3  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009783  VIBHAR_00584  response regulator  38.6 
 
 
467 aa  84.3  5e-16  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  37.61 
 
 
142 aa  84.3  5e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011146  Gbem_0671  two component, sigma54 specific, transcriptional regulator, Fis family  38.74 
 
 
469 aa  84  7e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_4230  helix-turn-helix, Fis-type  37.29 
 
 
187 aa  83.6  8e-16  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.547094  normal 
 
 
-
 
NC_011901  Tgr7_3262  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  37.61 
 
 
471 aa  83.6  8e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  42.31 
 
 
411 aa  83.6  9e-16  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_013456  VEA_001908  nitrogen regulation protein NR(I)  37.72 
 
 
467 aa  82.8  0.000000000000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  38.79 
 
 
473 aa  83.2  0.000000000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0016  nitrogen metabolism transcriptional regulator NtrC  34.71 
 
 
468 aa  83.2  0.000000000000001  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0855054  normal  0.786337 
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  40.37 
 
 
135 aa  82.4  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_3097  diguanylate cyclase  38.18 
 
 
458 aa  81.6  0.000000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  0.948135  n/a   
 
 
-
 
NC_009656  PSPA7_5107  putative two-component response regulator  37.93 
 
 
186 aa  81.6  0.000000000000003  Pseudomonas aeruginosa PA7  Bacteria  normal  0.546979  n/a   
 
 
-
 
NC_012918  GM21_1165  diguanylate cyclase  37.84 
 
 
459 aa  81.6  0.000000000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000192138 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  37.93 
 
 
473 aa  81.6  0.000000000000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  37.93 
 
 
473 aa  81.6  0.000000000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  37.61 
 
 
147 aa  81.6  0.000000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1641  response regulator receiver protein  40.54 
 
 
183 aa  81.6  0.000000000000003  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.772734  normal 
 
 
-
 
NC_008463  PA14_58300  putative two-component response regulator  37.93 
 
 
186 aa  81.6  0.000000000000003  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_4290  two component Fis family transcriptional regulator  36.07 
 
 
187 aa  80.9  0.000000000000005  Pseudomonas putida W619  Bacteria  normal  0.566048  normal 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  38.89 
 
 
121 aa  80.9  0.000000000000005  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  37.27 
 
 
157 aa  80.9  0.000000000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0684  two component, sigma54 specific, transcriptional regulator, Fis family  38.89 
 
 
469 aa  80.5  0.000000000000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000150794 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  35.45 
 
 
472 aa  80.5  0.000000000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  40.91 
 
 
141 aa  80.5  0.000000000000008  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  34.48 
 
 
480 aa  80.1  0.000000000000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  37.27 
 
 
135 aa  80.1  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  33.91 
 
 
481 aa  79.3  0.00000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  34.51 
 
 
406 aa  79.3  0.00000000000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_008789  Hhal_1419  two component Fis family transcriptional regulator  34.21 
 
 
178 aa  80.1  0.00000000000001  Halorhodospira halophila SL1  Bacteria  normal  0.104403  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  38.6 
 
 
133 aa  80.1  0.00000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_008554  Sfum_0656  response regulator receiver protein  41.67 
 
 
129 aa  79.3  0.00000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.663964  normal 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  40 
 
 
135 aa  79.7  0.00000000000001  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  35.78 
 
 
147 aa  79.3  0.00000000000002  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_002977  MCA2541  nitrogen regulation protein NR(I)  32.74 
 
 
470 aa  79  0.00000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2034  response regulator receiver protein  37.5 
 
 
300 aa  79  0.00000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2392  two component, sigma54 specific, transcriptional regulator, Fis family  37.07 
 
 
458 aa  79.3  0.00000000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.0321511  normal 
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  39.64 
 
 
127 aa  79  0.00000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  33.63 
 
 
465 aa  79  0.00000000000002  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_007912  Sde_0499  response regulator receiver domain-containing protein  33.93 
 
 
473 aa  79.3  0.00000000000002  Saccharophagus degradans 2-40  Bacteria  normal  0.021061  normal 
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  34.75 
 
 
446 aa  79.3  0.00000000000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1886  diguanylate cyclase  40.57 
 
 
462 aa  79  0.00000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_08281  two component, sigma54 specific, transcriptional regulator, Fis family protein  33.33 
 
 
388 aa  79.3  0.00000000000002  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  35.14 
 
 
494 aa  79.3  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_5047  two component, sigma54 specific, Fis family transcriptional regulator  34.51 
 
 
387 aa  79  0.00000000000002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0897789  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  40.19 
 
 
408 aa  79  0.00000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  39.09 
 
 
131 aa  78.2  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_002977  MCA2976  DNA binding response regulator  34.71 
 
 
184 aa  78.6  0.00000000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2500  two component Fis family transcriptional regulator  35.71 
 
 
476 aa  78.2  0.00000000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  35.71 
 
 
470 aa  78.2  0.00000000000003  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  37.04 
 
 
120 aa  78.2  0.00000000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_0666  two component transcriptional regulator, Fis family  36.52 
 
 
180 aa  78.2  0.00000000000003  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  35.96 
 
 
472 aa  78.6  0.00000000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_002947  PP_0888  two component transcriptional regulator, Fis family  35.25 
 
 
186 aa  78.2  0.00000000000004  Pseudomonas putida KT2440  Bacteria  normal  0.414248  normal 
 
 
-
 
NC_009512  Pput_0927  two component Fis family transcriptional regulator  35.25 
 
 
187 aa  78.2  0.00000000000004  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  40.35 
 
 
151 aa  77.8  0.00000000000004  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_0931  two component Fis family transcriptional regulator  35.25 
 
 
187 aa  78.2  0.00000000000004  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  35.71 
 
 
470 aa  77.4  0.00000000000006  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_013889  TK90_0988  two component, sigma54 specific, transcriptional regulator, Fis family  35.4 
 
 
468 aa  77.4  0.00000000000006  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  41.44 
 
 
143 aa  77.4  0.00000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009675  Anae109_2205  two component Fis family transcriptional regulator  37.5 
 
 
182 aa  77.4  0.00000000000006  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.143694 
 
 
-
 
NC_009439  Pmen_0848  two component Fis family transcriptional regulator  34.43 
 
 
186 aa  77  0.00000000000007  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0246  nitrogen metabolism transcriptional regulator, NtrC, Fis family  32.48 
 
 
469 aa  77  0.00000000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.487777  n/a   
 
 
-
 
NC_008255  CHU_1965  response regulatory protein, sigma 54 related  35.58 
 
 
384 aa  77  0.00000000000009  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0275961  normal  0.129103 
 
 
-
 
NC_008740  Maqu_2223  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  35.71 
 
 
725 aa  76.3  0.0000000000001  Marinobacter aquaeolei VT8  Bacteria  normal  0.847933  n/a   
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  32.17 
 
 
480 aa  76.6  0.0000000000001  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_010581  Bind_1884  response regulator receiver sensor signal transduction histidine kinase  33.33 
 
 
389 aa  76.3  0.0000000000001  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.329348  normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  36.45 
 
 
119 aa  76.6  0.0000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_2092  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 
462 aa  76.3  0.0000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.131918 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  33.04 
 
 
480 aa  75.9  0.0000000000002  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009052  Sbal_2896  response regulator receiver protein  40 
 
 
367 aa  75.5  0.0000000000002  Shewanella baltica OS155  Bacteria  hitchhiker  0.00201335  n/a   
 
 
-
 
NC_007492  Pfl01_0821  two component Fis family transcriptional regulator  35.54 
 
 
186 aa  75.9  0.0000000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0974274  normal  0.860547 
 
 
-
 
NC_009665  Shew185_2906  response regulator receiver protein  40 
 
 
367 aa  75.5  0.0000000000002  Shewanella baltica OS185  Bacteria  normal  0.0132666  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  38.1 
 
 
129 aa  75.9  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1467  response regulator receiver protein  40 
 
 
367 aa  75.5  0.0000000000002  Shewanella baltica OS223  Bacteria  normal  0.0140274  normal 
 
 
-
 
NC_009943  Dole_2811  multi-sensor signal transduction histidine kinase  36.28 
 
 
498 aa  75.5  0.0000000000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.782124  n/a   
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  38.32 
 
 
139 aa  75.9  0.0000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3038  response regulator receiver protein  40 
 
 
367 aa  75.1  0.0000000000003  Shewanella baltica OS195  Bacteria  normal  0.0232368  normal 
 
 
-
 
NC_011769  DvMF_2109  two component, sigma54 specific, transcriptional regulator, Fis family  34.13 
 
 
515 aa  75.1  0.0000000000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008321  Shewmr4_1312  response regulator receiver protein  39 
 
 
367 aa  74.7  0.0000000000003  Shewanella sp. MR-4  Bacteria  hitchhiker  0.000399806  normal 
 
 
-
 
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